Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03170 ATGAGCGACTTCGAAGAACCTTCTGATGTTGTTTCCACTACGAAGAACAACATTCCAGAACCGGAAAAGGAAAACAGACCGTCTCCACCGTCGGTTATAGCTGGTAGAAGCCGTTCTCAAGGAGGTGGACGGAGAGTAACACCGACGAGCTTCACCGTTGTTTCTGAAGGTAGATCTGTTGTTGAAAGAGTACTTCCTAATGGAGATTTCTACGTCGGTAGTTTCTCCGGCACCGTACCTAATGGATCCGGAAAATACCTTTGGACCGACGGTTGCATGTATGAAGGTGAATGGAAAAGAGGAAAAGCTTCAGGTAAAGGTAAGTTTTCATGGCCATCGGGTGCGACTTACGAGGGAGAGTTCAAGTCGGGTCGAATGGAAGGGTTTGGAACTTTTGTTGGATCCGACGGTGATACTTATCGCGGGTCATGGAGCTCCGATAGAAAACACGGGTTTGGTCAGAAACGTTACGCAAACGGTGATTTATATGAAGGATGGTGGAAGCGTAACGTTCAAGATGGTCAAGGACGTTACGTTTGGAAGAATGGGAATGAATACGTTGGTGAGTGGCGTAACGGTGTTATTTCTGGTAAAGGTGTTTTGGTTTGGGTTAACGGAAACCGTTTTGAGGGTCAATGGGAGAATGGTGTACCGAAAGGACAAGGAATCGTGAAGATACAGCATGGTTTGAATTTGAAGAGTTCAAATTGTGTTGGTGTTGGTTTTGGTGTTACTGGTGGTGGTTTGGTGTGGAATGACAATTTTGCCCCTGCTATGATGAGAAAACGTTCTTCTGTTGATACTGTTAGTGCTAGAGGGAGTGTGAATGAAAAGAGTTTTCCTAGGATTTGTATTTGGGAATCTGAAGGTGAAGATATCACTTGTGATATTGTTGATAATGTGGAAGCTTCCATGTTTTATCGGGATGGAACAACGTCGGATCCTGATGAGTTTAGAAAGCACCCTTGTTGTTTTTCTTCTGAGGTAAAGAGACCAGGTCAAACTATTTCCAAAGGGCATAAGAATTACGAGTTGACGCTTAATTTGCAATTGGGAATTAGATACACTGTTGGGAAGGAAGCATCTAAGTTGCGCGAGCTTAAACCTAGTGATTTTGATCCTAAGGAGAAGTTCTGGACAAGGTTTCCATCTGAAGGTTCTAAACTTACTCCGCCCCATCAAACTGCGGAGTTTCGATGGAAAGATTACTGTCCTGTGGTTTTTCGACATTTGAGGAAGCTGTTTCAGGTTGATCCTGCTGATTACATGTTGGCTATATGTGGGGATGATGCACTCAGGGAACTTTCCTCTCCCGGGAAAAGCGGAAGTGTCTTCTACTTGACCCAAGATGACAGATTCATGATTAAGACAGTGAAGAAATCTGAAGTCAAGGTGCTTCTTCGGATGCTTCGGAGCTATTACAAGCACGTGTCTAAATATGAGAATTCACTTGTGACAAAATTCTACGGGGTACATTGTGTCAAACCAATTGGAGGCCAGAAGACTCGGTTTATTGTGATGGGCAACCTTTTCTGCTCTGAATATCCAATTCATAGACGATTTGATTTGAAAGGATCTTCACATGGCCGTGCAACCGATAAACCCGAGGATGAGATTGATGAGACGACCACCCTCAAGGACCTTGACCTGAATTATGTGTTTCGTGTGCAAAGAAATTGGTTTCAGGATCTTATTAAACAAATTGAGCGGGATTGTGAGTTCTTAGAAACGGAGAAAATTATGGATTACAGTCTGTTGGTTGGACTTCATTTCCGTGATGACAACACATATGACAAAATGGGGTTGTCACCTTTTCTTTTACGCACTGGCAACCAGGATTCTTATCATAATGAGAAGTTCATGCGTGGTTACCGCTTTCTCGAAGCAGAGCTGCAAGATAGGGATCGGGTTAAATCTGGAAGGAAATCATTAATCAGGCTAGGAGCTAATATGCCTGCAAGAGCAGAGCGACTTGCAAGGAGGAGTGATTTCGATCAATATGTTGGAATCAGTCATTTGAACCCGTATAGCAGTGGAGAGACTTACGACTGCATTTTATATTTCGGCATTATCGACATTTTGCAAGACTATGATATCAGCAAGAAGCTTGAGCATGCTTACAAGTCCTTCCAAGTTGACTCTACTTCAATTTCTGCCGTTGATCCAAAGCTTTACTCGAAGAGATTTCGAGATTTTATCGGTAGAATATTCATCGAAGACTGGTAG 2226 0.4313 MSDFEEPSDVVSTTKNNIPEPEKENRPSPPSVIAGRSRSQGGGRRVTPTSFTVVSEGRSVVERVLPNGDFYVGSFSGTVPNGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYRGSWSSDRKHGFGQKRYANGDLYEGWWKRNVQDGQGRYVWKNGNEYVGEWRNGVISGKGVLVWVNGNRFEGQWENGVPKGQGIVKIQHGLNLKSSNCVGVGFGVTGGGLVWNDNFAPAMMRKRSSVDTVSARGSVNEKSFPRICIWESEGEDITCDIVDNVEASMFYRDGTTSDPDEFRKHPCCFSSEVKRPGQTISKGHKNYELTLNLQLGIRYTVGKEASKLRELKPSDFDPKEKFWTRFPSEGSKLTPPHQTAEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGDDALRELSSPGKSGSVFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYKHVSKYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRATDKPEDEIDETTTLKDLDLNYVFRVQRNWFQDLIKQIERDCEFLETEKIMDYSLLVGLHFRDDNTYDKMGLSPFLLRTGNQDSYHNEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERLARRSDFDQYVGISHLNPYSSGETYDCILYFGIIDILQDYDISKKLEHAYKSFQVDSTSISAVDPKLYSKRFRDFIGRIFIEDW 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03170 741 CDD PIPKc_AtPIP5K_like 342 736 - -
Trre9g03170 741 PIRSF PIP5K_plant 26 235 IPR017163 GO:0005524|GO:0016308
Trre9g03170 741 PIRSF PIP5K_plant 249 741 IPR017163 GO:0005524|GO:0016308
Trre9g03170 741 SMART PIPK_2 368 738 IPR002498 GO:0016307|GO:0046488
Trre9g03170 741 FunFam Phosphatidylinositol 4-phosphate 5-kinase 328 509 - -
Trre9g03170 741 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 80 737 IPR023610 -
Trre9g03170 741 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 335 737 IPR002498 GO:0016307|GO:0046488
Trre9g03170 741 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 427 735 IPR002498 GO:0016307|GO:0046488
Trre9g03170 741 SMART morn 115 136 IPR003409 -
Trre9g03170 741 SMART morn 207 228 IPR003409 -
Trre9g03170 741 SMART morn 184 205 IPR003409 -
Trre9g03170 741 SMART morn 161 182 IPR003409 -
Trre9g03170 741 SMART morn 69 90 IPR003409 -
Trre9g03170 741 SMART morn 138 159 IPR003409 -
Trre9g03170 741 SMART morn 92 113 IPR003409 -
Trre9g03170 741 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 328 509 IPR027484 -
Trre9g03170 741 Gene3D - 510 737 - -
Trre9g03170 741 Pfam MORN repeat 209 223 IPR003409 -
Trre9g03170 741 Pfam MORN repeat 140 161 IPR003409 -
Trre9g03170 741 Pfam MORN repeat 94 115 IPR003409 -
Trre9g03170 741 Pfam MORN repeat 163 184 IPR003409 -
Trre9g03170 741 Pfam MORN repeat 71 93 IPR003409 -
Trre9g03170 741 Pfam MORN repeat 117 139 IPR003409 -
Trre9g03170 741 Pfam MORN repeat 186 208 IPR003409 -
Trre9g03170 741 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 66 170 - -
Trre9g03170 741 MobiDBLite consensus disorder prediction 1 48 - -
Trre9g03170 741 Gene3D - 101 144 - -
Trre9g03170 741 Gene3D - 58 100 - -
Trre9g03170 741 MobiDBLite consensus disorder prediction 1 18 - -
Trre9g03170 741 SUPERFAMILY SAICAR synthase-like 338 737 - -
Trre9g03170 741 Gene3D - 145 237 - -
Trre9g03170 741 FunFam Phosphatidylinositol 4-phosphate 5-kinase 101 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03170 Trre-Chr9 40129780 40133777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03170 36 740 Acyl Lipid Metabolism Gene Families AT1G21980 73.066 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03170 K00889 - gmx:100790632 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03170 9 40129780 40133777 Trre9g03170 9 40129780 40133777 ECH