Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03142 ATGGCGAGAAAAACCAGCAATTGCACCATATGCGAGAATTCTAATCAACCTTCTATATGTTCTGTTTGTGTCAATTACAGGTTAAATGAGTATAACACTTCGTTGAAATCATTGAAAGAGCGTCGAGATTCGTTGTACTCAAAATTGAGCGAAGTTCTTGTCCGTAAGGGAAAGGGAGATGATCAAACAAATTGGAGAGTCCTTCGACATGAAAAGCTTGCAAGGTTGAGGGAGAAGCTTCGCAATAGTAAAGAACAAGCTACTCAAGGAAGAGCTAAGATAGAGACCTTGTCTGCTGATCTGAAACTTAAATATGGAGTGCTTGAATCTGCCCTTTCTATGTTGGAAAAGAATCGAGTGGAACAACTGGAGAAGTTCTACCCAAATCTTATAGGCACCCAGAGCTTAGGGCATGTGGCGATTACCTCTGAGCGTCTTCATAAACAGTCTGTGGTCATAAAACAAATATGCAAGTTGTTTCCACAACGCCGGGTAGTTATAGAGGGAGAGAAGAGGGATGATTGTAGTGGTCAATATGATCAAATTTGCAATGCACGCTTACCAAGAGCACTTGATCCGCATTCTGTTCCATCAGAAGAGCTTTCTGCATCTTTAGGATACATGGTGCAACTTCTAAATCTTGTTGTTCACAACTTGGCTGCCCCGGCACTTCATAACTCAGGTTTTGCGGGTTCTTGCTCTCGAATATGGCAACGGGATTCTTATTGCGATGCACGGCCTTCATCCAGGAGCAATGAATATCCACTTTTTATACCTCGCCAAAATTATTGCTCGACCAGTGGGGAAAACTCATGGTCTGAAAAAAGTTCAAGCAATTTCGGTGTTGCGTCAATGGAATCTGATAGGAGGCCTCGTCTGGATTCATCTGGGAGTAGTAGCTTTAACTACTCTTTAGCTTCTTCGCATTCTGTTCAAACACACAAAGATCTGCAGAAAGGAATTTCACTTTTAAAGAAAAGTGTAGCATGCATAACTGCATACTGTTACAACTCCCTATGTTTGGATGTCCCTTCTGAGGCATCTACGTTTGAAGCATTTGCGAAGTTATTGGCCACTCTCTCATCATCCAAGGAAGTTCGATCTGTTTTCTCCTTGAAAATGGCTCGTTCCAGGACAAGCAAACAGGTTCAGCAATTGAACAAATCTGTATGGAATATGAACTCTGCTATTTCCTCAACTACTTTATTGGAAAGTACACATTCTGTGCCCACAACGAGAATTGAGAATTATATGCCAAGTTCTGCTGCTAGTTTTCTTTATCCTACTGATTCATCTGATGGAAAAAGTGAGTGCCTAATTGAAGGGGGGTGGGACATTGTTGAGCATCCCACTCTTCCTCCCCCGCCATCACAAAGTGAGGACGTTGAGCACTGGACTCGAGCCATGTTCATAGATGCTAAAAGGAAATGA 1431 0.4228 MARKTSNCTICENSNQPSICSVCVNYRLNEYNTSLKSLKERRDSLYSKLSEVLVRKGKGDDQTNWRVLRHEKLARLREKLRNSKEQATQGRAKIETLSADLKLKYGVLESALSMLEKNRVEQLEKFYPNLIGTQSLGHVAITSERLHKQSVVIKQICKLFPQRRVVIEGEKRDDCSGQYDQICNARLPRALDPHSVPSEELSASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYCDARPSSRSNEYPLFIPRQNYCSTSGENSWSEKSSSNFGVASMESDRRPRLDSSGSSSFNYSLASSHSVQTHKDLQKGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLKMARSRTSKQVQQLNKSVWNMNSAISSTTLLESTHSVPTTRIENYMPSSAASFLYPTDSSDGKSECLIEGGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03142 476 Coils Coil 73 93 - -
Trre9g03142 476 MobiDBLite consensus disorder prediction 268 284 - -
Trre9g03142 476 Coils Coil 28 48 - -
Trre9g03142 476 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 7 396 - -
Trre9g03142 476 MobiDBLite consensus disorder prediction 268 295 - -
Trre9g03142 476 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 366 IPR018791 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03142 Trre-Chr9 39733020 39739525 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03142 - - gmx:100776426 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03142 9 39733020 39739525 Trre9g03142 9 39733020 39739525 ECH