Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03092 ATGACAAAATCTATCAACATCAAAATATGGTTTCTTAATTTGATTAGTATCTTGTTTGTAATGACACATGGGAGACCAGTTAATCCTGAGTTTAGAGTGAAAGCAGTTAATCTTGGTGGTTGGTTGGTTACTGAAGGTTGGATGAAACCTTCTCTGTTCGATGCCATTCCAAATAAAGACTTCTTGGATGGAACTGGTCTTCAGTTCAAATCAGTGACAACAAAGAAATATCTATGTGCAGAGTCTGGAGGTGGAACTATCCTTGTTGCAAACCGCACAGCCGCTTCCGGTTGGGAAACATTTAAATTGTGGAGACTAAATAAGGAAACTTTCAGATTCAGAGTGTTTAACCAACAATTTGTGGGGTTAGATGGGATCAATGCTGTTGCTGTTACAAATTCTTCCACAGATTCTGCAACTTTCCATATTGTTAAGGAAAATGCAAATTCCACCCGTGTTCGAATCAAAGCATCCAATGGATACTTCTTACAGGCAAAAACAGAGGAGTTGGTGACAGTTGATGTTTCAAAGGTTAAAGGATGGAGAGATGATGATCCAACTGTTTTTGAAATGACCATTGCTGCAAGATTACAAGGCGATTTCCAAATAACAAATGGCTATGGGTCTAGAAAGGCTGCACAGGTTATGAAGGACCACTGGAGCAGTTTTATAGTTGAAGATGATTTCAAGTTCATAGCCAGTAATGGACTCAATGCAGTTAGAATTCCAGTAGGTTGGTGGATAGCAAGTGACCCAACTCCACCGTGGCCTTATGTTGGAGGTTCATTGCACGCACTAGACAATGCTTTCTTATGGGCCCATAAATATGGAATAAAAATCATTATTGACCTTCATGCTGCTCCTGGTTCTCAAAATGGCTTTCAACATAGTTCTTCAAGAGATGGATCACAAGAATGGGGAAAATCAGATGAAAACATCAAACAAACTGTTGATGTTATAAGCTTCCTAACTTCAAGGTATGTAAAAAACCCAAGCCTATATGCAGTTGAGCTAATAAATGAACCCCTCTCTCCTGGTGTGACATTAGAGAGCTTGAACAAGTACTACAAGGCTGGTTATGACGCAGTGCGTAAACACTCAAGTACTACTTATGTGGTTATGTCAAATAGGCTAGGACCCTCAGAGCCCAAAGAGCTCTTTCCTCTTGCCAATGGACTCATGCGGTGTGTCATTGATGTCCACTACTACAACATTTTTAATGATTTGTTTGAAAACATGACTGCCCAACAAAACATTGATTTTATTTACAACAACCGCTCATCAGAGTTGAATTTTATTACTACATCAAATGGTCCTCTTACTTTTGTTGGTGAATGGGTTTCTGATTGGCGAGTTAAAGAAGCTACAAAAGAAGACTTTCAAAGATTTGGTAAGGCTCAAATGGATGTTTTCGGTCGAGCAACATTTGGTTGGGCTTACTGGGCTTTTAAGAATGCAAACCAACATTGGAGTCTCGAGTGGATGATTAATAATGGTTATATCAAGCTTTAG 1512 0.3922 MTKSINIKIWFLNLISILFVMTHGRPVNPEFRVKAVNLGGWLVTEGWMKPSLFDAIPNKDFLDGTGLQFKSVTTKKYLCAESGGGTILVANRTAASGWETFKLWRLNKETFRFRVFNQQFVGLDGINAVAVTNSSTDSATFHIVKENANSTRVRIKASNGYFLQAKTEELVTVDVSKVKGWRDDDPTVFEMTIAARLQGDFQITNGYGSRKAAQVMKDHWSSFIVEDDFKFIASNGLNAVRIPVGWWIASDPTPPWPYVGGSLHALDNAFLWAHKYGIKIIIDLHAAPGSQNGFQHSSSRDGSQEWGKSDENIKQTVDVISFLTSRYVKNPSLYAVELINEPLSPGVTLESLNKYYKAGYDAVRKHSSTTYVVMSNRLGPSEPKELFPLANGLMRCVIDVHYYNIFNDLFENMTAQQNIDFIYNNRSSELNFITTSNGPLTFVGEWVSDWRVKEATKEDFQRFGKAQMDVFGRATFGWAYWAFKNANQHWSLEWMINNGYIKL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03092 503 PANTHER FASCIN 28 503 IPR010431 GO:0007015|GO:0051015
Trre9g03092 503 FunFam Glucan 1,3-beta-glucosidase A 44 182 - -
Trre9g03092 503 FunFam Glucan 1,3-beta-glucosidase A 185 503 - -
Trre9g03092 503 Gene3D - 43 183 - -
Trre9g03092 503 SUPERFAMILY (Trans)glycosidases 32 501 IPR017853 -
Trre9g03092 503 Pfam Cellulase (glycosyl hydrolase family 5) 215 486 IPR001547 GO:0004553|GO:0071704
Trre9g03092 503 SUPERFAMILY Actin-crosslinking proteins 67 181 IPR008999 -
Trre9g03092 503 Gene3D Glycosidases 184 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03092 Trre-Chr9 39308914 39314584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03092 - - gmx:100790619 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03092 9 39308914 39314584 Trre9g03092 9 39308914 39314584 ECH