Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03076 ATGGATAGCATAATGAACAAGCTTCGGAATCTCGATGCATATCCTAAAATCAACGAAGATTTTTATAGTCGCACGCTTTCTGGCGGTGTTATTACTCTCGCTTCCTCCATTCTCATGCTCTTGCTTTTCTTCTCTGAGCTTTGGTTGTATCTTCATGCTTCAACTGAAACTAAGCTCGTTGTAGATACTTCTAGAGGAGAAACGCTTCGTATCAATTTTGATGTTACATTTCCTGCACTAGCATGTTCTATAGTTAGTCTCGATGCCATGGACATAAGTGGAGAGCAGCATTTGGATGTAAGACATGATATAATCAAGAAAAGAATAGACTCTCATGGCAATGTGATAGAAACAAGGCAAGATGGAATTGGTTCTCCCAAGATTGAAAAACCCTTGCAAAAGCATGGCGGCAGGCTTGAGCACAATGAGACTTATTGCGGATCCTGTTATGGTGCTGAGTCGTCGGACGAGGAATGTTGTAATTCCTGCGAGGAAGTTCGTGAAGCATATCGAAAGAAAGGTTGGGGACTCTCAAACCCGGATGAAATTGACCAGTGCAAAAGAGAAGGATTCTTAGAAAGAATCAAGGAAGAAGAAGGCGAAGGATGCAATGTATATGGCTTCTTGGAAGTAAACAAGGTGGCAGGGAATTTCCATTTTGCTCCTGGGAAAAGCTTTCAGCAATCTGGTGTACATGTGCATGACCTGCTGGCTTTTCAAAAGGAATCATTTAATTTAAGTCACCACATCAACAGAGTAGCCTTTGGAGACTATTTTCCCGGTGTCGTAAATCCTCTTGACCGTGTGCATTGGACGCAAGAATCCCCAACTGGGATGTATCAGTATTTTATTAAGGTTGTGCCAACTATGTACACTGACGTGAGTGGGAACACTATCCAGTCAAACCAGTTCTCTGTGACAGAACACTTCAGGACTGGAGATGTAGGCCGATTGCAGTCCCTCCCTGGAGTTTTTTTCTTCTATGACCTTTCTCCAATTAAGGTTACTTTTACAGAAGAAAATGTCTCATTCTTACACTTTCTTACTAATGTGTGTGCCATAGTAGGAGGTATTTTCACTGTTTCTGGAATACTAGATTCATTCATCTATCATGGCCAAAAGGCTATCAAGAAGAAGATGGAACTCGGTAAATTTAACTGA 1161 0.4152 MDSIMNKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFFSELWLYLHASTETKLVVDTSRGETLRINFDVTFPALACSIVSLDAMDISGEQHLDVRHDIIKKRIDSHGNVIETRQDGIGSPKIEKPLQKHGGRLEHNETYCGSCYGAESSDEECCNSCEEVREAYRKKGWGLSNPDEIDQCKREGFLERIKEEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKESFNLSHHINRVAFGDYFPGVVNPLDRVHWTQESPTGMYQYFIKVVPTMYTDVSGNTIQSNQFSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEENVSFLHFLTNVCAIVGGIFTVSGILDSFIYHGQKAIKKKMELGKFN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03076 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Trre9g03076 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Trre9g03076 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 385 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03076 Trre-Chr9 39159989 39169433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03076 K20367 - gmx:100782309 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03076 9 39159989 39169433 Trre9g03076 9 39159989 39169433 ECH