Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03013 ATGTCTCTCTCTTCAACTTCAAACTCTCTCATTCAAACTAAGTCATTAATCCAACAACAACCTCATTCCTCTCTCACCAACCAATCCTCATTTCCAATCGGGCTTAAACCCAAGCCCAATCACAAGCCCAAGCCCAATTCAATCTTCGCCGTTCACGCCGCCGAGCCAGCAAAAAACCCAGTCGTAACAGAAAAGCCTTCAAAACCACAACCAACAACAATTCCTCGTAATGTCGCTTCGACGAAATGGACAATCGATAGCTGGAAATCGAAGAAGGCTTTACAGCTTCCAGAATACCCTAATCAGGAAGAACTTGAATCGGTTCTGAAAACTCTCGATGATTTTCCTCCGATTGTTTTCGCTGGTGAAGCTAGAACTTTGGAGGAACATTTGGGTGATGCTGCTATGGGAAACGCGTTTCTTCTTCAAGGTGGTGATTGTGCTGAAAGTTTTAAGGAGTTTAATGCTAATAATATTCGTGATACTTTCAGAATTATTCTTCAGATGAGTGTTGTTATGATGTTCGGTGGTCAAATGCCGGTTATTAAGGTGGGGAGAATGGCGGGTCAATTTGCGAAGCCAAGATCGGATAATTTTGAGGAGAAGAATGGTGTGAAGCTTCCGAGTTACAGAGGGGATAACATCAATGGTGATACGTTTGATGAAAAATCAAGGACTCCGGATCCTCAGAGGATGATTCGTGCTTATTGTCAAGCTGCAGCTACTCTGAATCTTCTCAGAGCTTTTGCTACTGGTGGTTATGCTGCTATGCAGAGGGTTACTCAATGGAATTTGGATTTCACTGAACAAAGTGAGCAAGGAGACAGGTACCGAGAGCTTGCTAACCGAGTCGATGAGGCCCTGGGATTCATGGCTGCTGCTGGACTCACAGTTGACCATCCAATAATGAGAACAACTGATTTCTGGACATCTCATGAATGCTTGTTATTGCCATATGAACAATCACTCACTAGGTTGGATTCAACTTCCGGTCTCTATTATGACTGCTCGGCCCATATGATTTGGGTCGGTGAAAGGACCAGGCAGCTGGATGGTGCCCATGTTGAATTTCTTAGAGGAGTTGCCAATCCCTTGGGAATCAAGGTAAGTGACAAGATGGACCCAAATGAGCTTGTTAAACTCATTGAGATCTTGAATCCCCAAAACAAACCAGGGAGAATTACTATTATCACTAGGATGGGAGCTGAAAATATGAGGGTGAAGCTTCCACATCTAATCAGGGCCGTGCGCAGAGCAGGACAAATTGTCACATGGGTCAGCGATCCTATGCATGGAAACACCATTAAGGCTCCATGTGGTCTTAAAACTCGCCCCTTCGATGCCATCAGGGCTGAAGTGAGAGCATTCTTCGATGTTCACGAACAAGAAGGAAGCCACCCAGGAGGAGTTCATCTCGAGATGACAGGTCAAAACGTGACTGAGTGCATTGGTGGGTCAAGGACAGTCACATTCGACGACCTTAGCTCACGCTACCACACACACTGCGATCCAAGACTCAATGCTTCACAATCTCTTGAGCTTGCATTCATCATTGCTGAAAGGCTAAGAAAGAGTAGAATCAGATCACAGCCTCCTCTTACCTCCGGTGGAATGTTTTAA 1620 0.4506 MSLSSTSNSLIQTKSLIQQQPHSSLTNQSSFPIGLKPKPNHKPKPNSIFAVHAAEPAKNPVVTEKPSKPQPTTIPRNVASTKWTIDSWKSKKALQLPEYPNQEELESVLKTLDDFPPIVFAGEARTLEEHLGDAAMGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDNFEEKNGVKLPSYRGDNINGDTFDEKSRTPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTEQSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMRTTDFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRIRSQPPLTSGGMF 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03013 539 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 83 525 IPR002480 GO:0003849|GO:0009073
Trre9g03013 539 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 44 530 IPR002480 GO:0003849|GO:0009073
Trre9g03013 539 Pfam Class-II DAHP synthetase family 83 519 IPR002480 GO:0003849|GO:0009073
Trre9g03013 539 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 272 524 - -
Trre9g03013 539 SUPERFAMILY Aldolase 72 523 - -
Trre9g03013 539 Gene3D Aldolase class I 268 524 IPR013785 -
Trre9g03013 539 MobiDBLite consensus disorder prediction 1 34 - -
Trre9g03013 539 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03013 Trre-Chr9 38331017 38335266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03013 K01626 - gmx:100797019 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03013 9 38331017 38335266 Trre9g03013 9 38331017 38335266 ECH