Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03007 ATGGGTGTCTCTTTCCTCTCAACCTCAACTCTTCCTTCTTTCTTTCCACTTGGTTCTCATAATCCTAAAACAGCCACAACCAGATATCAACCTCGTTCTGTGACCATTTGTTGTACTAAAATCAAAACTGATGTTAGTGGTGAAGAAGAACAATTCAATTGGAGACGAAGAGACGTCCTTAAATGCATTGGTGTTACCATTGCTTTGGAATCGATAACAAGTTCTGGATCGCTTGTTGAAACAGCTAATGCTGCTGACCTGATAGAACGCAGACAGCGTTCTGAATTTCAATCTCAAATTAAAGGAACACTTTATACCGCCATTAAGGAAAAACCTGATCTTGTTCCATCCATACTAAGACTGGCTCTAAATGATGCTTTGACTTATGATAAGGAAACGAAAACGGGTGGCCCAAATGGCTCTATACGGTTCAGCTCAGAAATAAGTAGACCTGAAAACAAGGGGCTTTCTGAAGCCTTGAACTTCATAGAGGAAGCTAAAAAAGAGATAGATTCATATTCCAAAGGTGGACCCATTTCCTATGCAGATCTCATCCAGTATGCAGCACAAAGTGCAACAAAGGCTCAATTTTTAGCTTCTGCAATTCGCAAATGCGGTGGAAATGTGGAGAAAGGGAATTTACTGTACACTGCATATGGATCAAATGGACAGTGGGGTTTGTTCGATAGGCAATTCGGTAGGACTGATACTCAAGAGCCAGATCCAGAAGGGAGAATTCCAATTTGGGAGAAAGCAACTGTTCAGGAAATGAAAGATAAATTTTCTGCAGTAGGTTTGGGTCCTCGCCAGCTGGCAGTTTTATCTGCATTCATAGGTCCTGATCAGGATACAACAGAGACCTTATTGGCATCTGATCCGGACGTTGCTCCATGGGTACAAAAATACCAACGGAGCCGTGAAACTGTCTCACGGACAGATTATGAGGTTGATCTGATAACAACTTTCACGAAATTGAGTACCTTGGGACAAAAAATTAACTATGAGGCATATACATATCCTCGTGCAAAGATCGATATTACCAAACTCAAATTGTAA 1056 0.411 MGVSFLSTSTLPSFFPLGSHNPKTATTRYQPRSVTICCTKIKTDVSGEEEQFNWRRRDVLKCIGVTIALESITSSGSLVETANAADLIERRQRSEFQSQIKGTLYTAIKEKPDLVPSILRLALNDALTYDKETKTGGPNGSIRFSSEISRPENKGLSEALNFIEEAKKEIDSYSKGGPISYADLIQYAAQSATKAQFLASAIRKCGGNVEKGNLLYTAYGSNGQWGLFDRQFGRTDTQEPDPEGRIPIWEKATVQEMKDKFSAVGLGPRQLAVLSAFIGPDQDTTETLLASDPDVAPWVQKYQRSRETVSRTDYEVDLITTFTKLSTLGQKINYEAYTYPRAKIDITKLKL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03007 351 PRINTS Plant ascorbate peroxidase signature 115 130 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre9g03007 351 PRINTS Plant ascorbate peroxidase signature 147 171 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre9g03007 351 PRINTS Plant ascorbate peroxidase signature 275 300 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre9g03007 351 PRINTS Plant ascorbate peroxidase signature 133 143 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre9g03007 351 FunFam thylakoid lumenal 29 kDa protein, chloroplastic 83 251 - -
Trre9g03007 351 Pfam Peroxidase 103 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03007 351 ProSiteProfiles Plant heme peroxidase family profile. 95 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03007 351 CDD plant_peroxidase_like 100 348 - -
Trre9g03007 351 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 61 341 IPR044831 GO:0004601|GO:0034599
Trre9g03007 351 Gene3D - 269 351 - -
Trre9g03007 351 Gene3D - 84 265 - -
Trre9g03007 351 SUPERFAMILY Heme-dependent peroxidases 80 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03007 Trre-Chr9 38280889 38284834 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03007 K00434 - gmx:100795192 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03007 9 38280889 38284834 Trre9g03007 9 38280889 38284834 ECH