Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02774 ATGTATTCTTCCAGAGGGAGTGGCGCTTACGGCCAATCCTACACTGGTCAATCCGCATATGGTCAAAACTTGAGTGCTAATTATTCTGGGGCATCTGTTGGAGGACATGATGCTACCCCACATTCTGCGGCTTCAAGGCATTCGGGTATATTAGGTAGTTCTCAGGATGCTGATGTTGGTAGTTATAGGGCTCATAATGCTGTTGCTCAGTATGGAGGACAGTATAGTTCTGTTTATGGTTCAGCGGCTATGAGTACCGCACAGCAGACTCCGTCTTTGAGTACCAAGGGAGCTGGGTCATCAGCTTTAGATGCTCGTGGGGGCTACTCTTTGGGTGTTTCAGATTCACCCAAGTTTGCTTCCAGTGACTATTTGTCATCATCCTCAACCCACGGGTATGGCCACAAATCTGATCAATTGTATGGTGACAAGAGTTTGGATTATTCTGGATTAGATAGAAGGCAGTATGGTGAACGTCAGAGTGGTTACATTGGTAGGGGTTTATCAAGTGATCCAACTGGACGCTATGCTACTGATTCTGTTGGATATAGTCATCAACATCAGGCCACTTTGCTTCGACAAGAGCAACTGCTGAAATCTCAGTCCCTGCAAGCTGCCTCACTGGATGGGGGTACAAGACAAACTGATTATCTTGCAGCTAGGGCTGCTGCAAGTCGTCACCCAACCCAAGATCTCATGTCTTATGGAGGAAGGATTGATTCTGAGCCCCATGCTTCATCAATGCTAAGTGCTACTTCATACAGTGGACAACATGCACCATCAATATTAGGAGCAGCACCAAGAAGAAATGTGGATGATCTCTTGTATTCCCAGAATGCATCAAATCCTGGTTATGGAGTGAGCCTGCCACCCGGTAGGGACTATGCCAGTGGAAAAGGTATTCATGGAAATGCTATGGATTTGGATTACCCAGCAAATCTGCTGTCACATGGTGGCCCAACTGATAGGAAGGATGACCGGGCTAGCTATCTTCGAGATTTTGAATTGAGGGAAGAAGAACGACGCCGGGACCGCTTGCGTGATAGAGATAGGGACAGAGAAAGGGACAAAGAACGAGAACGATTGCGAGAACGGGAACGAGATCGAGAAAAGGAACGCGAAAAGGAGCGCATGGAGCGGCGTGAAAAGGAGAGGGAGCGTGATCGCAAACGTGCACTTGAAGTTAAGCTTGAACGAACTCCAGTGCGATCCTCCAAGGACCCCCGTAGTACTTCAAAGGATCCTCGCGGGTCGTCTTTGACAAAGGAGGGGAAATCTTCACGACGGGACTCCCCACATCGTGGTGCTTTACATAGGCACCGTTCACCTGTTAAAGAAAAACGGAGAGAATATATCTGCAAGGTTTACCCTTCTTGTTTGGTAAATATTGAGAGGGATTACCTTTCAATTGACAAGCGATACCCGCGACTCTTCATCTCTCCCGAATTTTCCAAGGCTGTTGTGAACTGGCCGAAGGAAAGCCTTAAACTCTCTATGCATACTCCTATCAGTTTTGAGCATGATTTTGTTGAAGAAGAAAGTGCTAGAGACTCCTCCAGCAAGCTTTTGACGGTTCAACCTACAAGTTCAGAACAGAGAAATACAGTTTGGAATGCAAAAGTAATTTTGATGAATGGGCTTAGTAGGGGTGCATTGGAGGAGCTGTCATCAGATAAACTTCTTGATGACCGCGTTCCTCATATTTGCAATTTTCTTAGGTTTGCGATCCTTAAGAAGGACCATTCTTTCATGGCAGTTGGTGGTCCATGGGAACCTGCTGATGGTGGGGATCCATCTAATGATGATAGCTCTCTGATCAGAACAGCCCTTAGATACACAAAGGATATTATTCAGCTTGATTTGCAGAAGTGTCAACACTGGAACCGATTCCTTGAGATACATTATGATAGAATCGGTAAAGATGGTTTCTTCAGCCACAAGGAAATTACTGTACTTTATGTTCCTGATTTGTCTGACTGCCTCCCTTCATTGGACGAATGGCGTGATCAGTGGCTTGCCCACAAGAAAGCAGTGGCTGAAAGAGAACGTCAAATTTCTCTAAAGAAAGAGAAATCAAGGGCTAACAAGGAATCAAATGATAAATCAGATAAGAGGAAGGATTCCGCTGCATCTGGAAAATCAGATGTTAAGAAAAAGGAGAAAGACAATAGTACTGTTAAGGAAGAGAGTGAAAAAATAGCTGGCGCGAGTAAAAAGACAGTTGCTAAAAATGATGCCGTGGACGTAGGTGAAGGCAAGAGTGCTGAGAAAAAGCCAGGGGAAACTACCCCTGGTCAACCCACAGGAAGTGTGAAGTCTGTGAAGAAGAAAATTATAAAGAAGATTGTGAAAAAAGTTGTCAGTAAGACAAATGATACTGCAAAGAAACAAAGTGAGAAATCAGGTGAGAAGGATGTTGCAGACAAAGTGGTAACATCAGATGTTCCTGTTGATGAGGTGAAGTCTTCTGTAGATCCTACTGGGATTCAGACTTCTGGCAAAGACATAGCTGCGGCAGATATTCCTGTTGCGAAAACTGATGAAGAAGGGAAAAATAACAAGGAACTAAACAGTTTGGAAGATAAGCCTCTGGACAAACTGGATCCAGCAGTTAATTCAGGTACCAAGGATGCTACTGTGAAAACTATAAAAAAGAGGAAAATTATCAAGCGGGTACCTAAAAAGAAGGTGGTTGATGAGGCGTCTAAATCTGTAGTAAATGAAGAGAAAATTGCGGAAGTTCCGACAAATGATGGAACTGACGGCGCTGGCAAGCAGACTGCTGATGCAGACACTATAGTACCCGAGGGCAAGAAACTGGCAAAGGTAGTAGTAACCAAGAGAAAGTTGAAAACACCAACCTCTGGGGTGCAAGATGATGCAACTGATTCCAATAAAAGAAGCACGAATACTGATAAAAAGGATGGAGAGAATGCTGTGGCTGCTCCTTCAAATGATGTTACACAGAGCACCGGCAAGCTGGCTACTGATGCAGACAGAAAAATTACGCCGGTGGCAAAAAAGAAAATTGTGAAGGTAGTTCCTAAGAAAAAGTTAAAGGCGTCTACCTCTGATAAGCCAGAAGGTGCAGGTGATTCCAATAAAAATGAAATGAAGTCTGACAATGATGACAAGAAGGATGGAAAAGGAACTGGAGAAAAAAGTGGATCCAAAATAGCTAAACAGAAAACCTCTGAGAAAGATACTCAAATTGTGAAGGGGAAACTGAAAGTTGGGGATAAATCAAAAGATGAGAAAGTAACAAAAGAGAAAGATGGAAAAGATGAACCTAAAAGCAAATCTAGTAAAGAAGTGAAAGAGAAGAGGAAGTCTGATGAACCTCCTCGGCACCCTGGATTTGTTCTAAAAACAAAATCGACAAAAGATTCTAAACTACGGTCACTGTCACTGTCTCTGGATTCATTGTTGGATTATACTGACAAAGATGTTGAAGAGTCAACACTCGAGCTTTCATTGTTTGCCGAATCATTTTATGAAATGCTTCAGTTTCAAATGGGTAGTAGGATTTTGACTTTTCTTCAGAAACTTCGTGAAAAATTTGTGATCAAAAGAGCTCAGCGAAAGAGGCAGCGGGGAGAGGAGCCTGACAAGGATAGTGCAAACAAGACACCCACAAAACGTCAAAAGGGTGATGATTCTTCTGTTAAGAAGAGTGGGACAAAAGAGGACACATCAAATCCAACCCAAGCAGATAACGAAAAAACTGTTGCCGAGAATGATAATTCTAGTAATAAGGAGGATGATGTGAAGATGGAAAATGCATCAGACGAGGAAGTAGAGCCGGAAGAAGAGGACCCTGAAGAGGATCCAGAAGAGGAAATGGAAAATGGTAGTCCCCAACACGACTCATCCAATGATAAAAACGCTGAACAAGAGGCTGATGCAAAAAATGAATCTGAAAATGTTACTAGGAATGAAAAAGCAGCAGATGAAACTTCTAAAGGGGAAATAAAGGTTAAAGATGAGGTGAAAGAGTCCAAAGACGATGTTCAACTCAATGATGAAAAGGAAAGCAAGGTTGATACTATTAAGAAAGAAACCCCTGCTGTTGTGGACAAAGAATTGTTGAAGGCTTTTCGATTTTTTGATCGGAATCGTGTAGGCTACATTAGGGTTGAAGATATGAGAATAATAATCCACAATCTAGGGATGTTCCTTTCTCACAGGGATGTGAAGGAGCTTGTACAAAGTGCATTGTTGGAGAGCAACACCGGGAGGGACGATCGGATACTTTATATCAAGTTGGCGCGAATGAGCGACATTTGA 4287 0.4313 MYSSRGSGAYGQSYTGQSAYGQNLSANYSGASVGGHDATPHSAASRHSGILGSSQDADVGSYRAHNAVAQYGGQYSSVYGSAAMSTAQQTPSLSTKGAGSSALDARGGYSLGVSDSPKFASSDYLSSSSTHGYGHKSDQLYGDKSLDYSGLDRRQYGERQSGYIGRGLSSDPTGRYATDSVGYSHQHQATLLRQEQLLKSQSLQAASLDGGTRQTDYLAARAAASRHPTQDLMSYGGRIDSEPHASSMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYASGKGIHGNAMDLDYPANLLSHGGPTDRKDDRASYLRDFELREEERRRDRLRDRDRDRERDKERERLRERERDREKEREKERMERREKERERDRKRALEVKLERTPVRSSKDPRSTSKDPRGSSLTKEGKSSRRDSPHRGALHRHRSPVKEKRREYICKVYPSCLVNIERDYLSIDKRYPRLFISPEFSKAVVNWPKESLKLSMHTPISFEHDFVEEESARDSSSKLLTVQPTSSEQRNTVWNAKVILMNGLSRGALEELSSDKLLDDRVPHICNFLRFAILKKDHSFMAVGGPWEPADGGDPSNDDSSLIRTALRYTKDIIQLDLQKCQHWNRFLEIHYDRIGKDGFFSHKEITVLYVPDLSDCLPSLDEWRDQWLAHKKAVAERERQISLKKEKSRANKESNDKSDKRKDSAASGKSDVKKKEKDNSTVKEESEKIAGASKKTVAKNDAVDVGEGKSAEKKPGETTPGQPTGSVKSVKKKIIKKIVKKVVSKTNDTAKKQSEKSGEKDVADKVVTSDVPVDEVKSSVDPTGIQTSGKDIAAADIPVAKTDEEGKNNKELNSLEDKPLDKLDPAVNSGTKDATVKTIKKRKIIKRVPKKKVVDEASKSVVNEEKIAEVPTNDGTDGAGKQTADADTIVPEGKKLAKVVVTKRKLKTPTSGVQDDATDSNKRSTNTDKKDGENAVAAPSNDVTQSTGKLATDADRKITPVAKKKIVKVVPKKKLKASTSDKPEGAGDSNKNEMKSDNDDKKDGKGTGEKSGSKIAKQKTSEKDTQIVKGKLKVGDKSKDEKVTKEKDGKDEPKSKSSKEVKEKRKSDEPPRHPGFVLKTKSTKDSKLRSLSLSLDSLLDYTDKDVEESTLELSLFAESFYEMLQFQMGSRILTFLQKLREKFVIKRAQRKRQRGEEPDKDSANKTPTKRQKGDDSSVKKSGTKEDTSNPTQADNEKTVAENDNSSNKEDDVKMENASDEEVEPEEEDPEEDPEEEMENGSPQHDSSNDKNAEQEADAKNESENVTRNEKAADETSKGEIKVKDEVKESKDDVQLNDEKESKVDTIKKETPAVVDKELLKAFRFFDRNRVGYIRVEDMRIIIHNLGMFLSHRDVKELVQSALLESNTGRDDRILYIKLARMSDI 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02774 1428 MobiDBLite consensus disorder prediction 1018 1130 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 841 867 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 910 1133 - -
Trre9g02774 1428 FunFam ATP/GTP-binding protein family 1358 1426 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 1194 1226 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 684 758 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 341 444 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 1227 1244 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 785 815 - -
Trre9g02774 1428 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 11 806 IPR025224 GO:0006355
Trre9g02774 1428 MobiDBLite consensus disorder prediction 341 431 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 1245 1259 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 1283 1340 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 157 182 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 1191 1340 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 30 57 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 982 996 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 684 879 - -
Trre9g02774 1428 MobiDBLite consensus disorder prediction 1260 1282 - -
Trre9g02774 1428 SMART DBC1_2 565 690 IPR025954 -
Trre9g02774 1428 ProSiteProfiles EF-hand calcium-binding domain profile. 1357 1392 IPR002048 GO:0005509
Trre9g02774 1428 Pfam LAIKA domain 1115 1180 IPR045353 -
Trre9g02774 1428 SUPERFAMILY EF-hand 1360 1405 IPR011992 -
Trre9g02774 1428 Coils Coil 336 393 - -
Trre9g02774 1428 Gene3D - 1359 1423 - -
Trre9g02774 1428 Pfam DBC1 567 684 IPR025954 -
Trre9g02774 1428 Pfam BURAN domain 464 546 IPR045354 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02774 Trre-Chr9 35122466 35130951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02774 392 702 EF-hand Containing Proteins AT2G03150 57.099 5.47e-116 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02774 K25827 - gmx:100784665 1788.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02774 9 35122466 35130951 Trre9g02774 9 35122466 35130951 ECH