Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02768 ATGATTGGAGTAAATGTTGCAACAACACCAATAGCAGTAGCACAAAATTGGGGTACACGTTCTTTTCTTAAAGAACATTTTTTTGAGCCAGGTTTATCACCTGAAGATGCAGTTTTAAGGATAAAACAAACAGCTGAAGGGTTACATAATCTTAGGGAAATGTTGGAACATTTGTCATGGAGGTATGTTATGTTTTATATAAGATTGAAACAGAATTATCTTGAACAAGATTTGAAAAATGCTATTACTACTTTGCCTGAAAATCGTCGCAAGGAGTATGTTAAAACTGCTAATCAGTTGGTTGATAATTTGACTGAGATGGATCGTTATGTTCGGTCACCAAAGGTATATGAATCATACCTATACTATGAGAAGACATTGAAATCAATAGATGAACTTGTGGCTCTGTTAGCATAG 417 0.3429 MIGVNVATTPIAVAQNWGTRSFLKEHFFEPGLSPEDAVLRIKQTAEGLHNLREMLEHLSWRYVMFYIRLKQNYLEQDLKNAITTLPENRRKEYVKTANQLVDNLTEMDRYVRSPKVYESYLYYEKTLKSIDELVALLA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02768 138 Gene3D - 2 138 IPR023222 -
Trre9g02768 138 SUPERFAMILY Oxygen-evolving enhancer protein 3, 27 138 IPR023222 -
Trre9g02768 138 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 9 137 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Trre9g02768 138 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 14 138 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02768 Trre-Chr9 35056903 35058080 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02768 K08901 - cave:132178998 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02768 9 35056903 35058080 Trre9g02768 9 35056903 35058080 ECH