Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02671 ATGGTGGCGATGGGCACTACTGCAGTCATGAGATGCTCTCCCGGTAACGCTTTCTTCAGAGCTATCAAACCGATTACCCGAAATTCCAAGCTTCCCAATTCACTTTCACTCTCTTCATCTTCAACCCCAATCAACAAAGGAAGTGGATCAAGTTTTGGTAGTGGTGGAAGGGCATATGATGCATTGCTGTTGGATGCTGGAGGTACTCTCTTGCAATTGGCCAATCCTGTTGAGGAGACTTATGCCGCTATTGGATCCAAATATGGTTTGACTGTAAATCCAGCTGAGATAAAGCAAGGATTTAAGAGAGCATTTACTGCTAAATGGCCTGAAAAACTACGTTACCAGGGTGATGGGAGGCCATTTTGGAAATTTGTAGTTTCTGAAGCCACTGGTTGTGGAGACGAAGACTTTTTTGAGGAAGTTTATGAGTACTATGCAAAAGGTGATGCATGGCATCTTCCTAATGGAGCTTTTGAAACAATGACTCTTCTCAAGAATGCCGGAGTTAAGATGGCCGTTGTATCCAATTTCGACTCTCGCTTAAGGAAGCTATTGAAGGATCTTAATGTTTTGAATCTATTTGATGCTGTCATTATATCATCAGAGGTTGGATATGAAAAACCAGACCCAAGAATATTTCAAGCTGCTCTAGATCAAGTAAATGTAGAGGCTGGCAGAGCCTTACACATCGGAGATGATCTAAAGGCGGATAAATTGGGGGCCAACGCTGTAGGGATTGATTGCTGGTTATTGGGTATTGATGTGAAGACATTCTCTGAGATACAAATCCGCATTCTCGATCCAGAGTTATGTCACAGAAAGGAAGATAGAATAAAATGA 843 0.4223 MVAMGTTAVMRCSPGNAFFRAIKPITRNSKLPNSLSLSSSSTPINKGSGSSFGSGGRAYDALLLDAGGTLLQLANPVEETYAAIGSKYGLTVNPAEIKQGFKRAFTAKWPEKLRYQGDGRPFWKFVVSEATGCGDEDFFEEVYEYYAKGDAWHLPNGAFETMTLLKNAGVKMAVVSNFDSRLRKLLKDLNVLNLFDAVIISSEVGYEKPDPRIFQAALDQVNVEAGRALHIGDDLKADKLGANAVGIDCWLLGIDVKTFSEIQIRILDPELCHRKEDRIK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02671 280 NCBIfam HAD-IA family hydrolase 164 246 IPR006439 -
Trre9g02671 280 NCBIfam HAD hydrolase, REG-2-like, family IA 62 251 IPR011949 -
Trre9g02671 280 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 213 233 IPR006439 -
Trre9g02671 280 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 195 211 IPR006439 -
Trre9g02671 280 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 59 70 IPR006439 -
Trre9g02671 280 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 165 178 IPR006439 -
Trre9g02671 280 SUPERFAMILY HAD-like 59 253 IPR036412 -
Trre9g02671 280 PANTHER - 14 267 - -
Trre9g02671 280 CDD HAD_dREG-2_like 158 268 - -
Trre9g02671 280 Gene3D - 75 147 IPR044924 -
Trre9g02671 280 SFLD Haloacid Dehalogenase 59 252 - -
Trre9g02671 280 Pfam Haloacid dehalogenase-like hydrolase 137 249 IPR041492 -
Trre9g02671 280 MobiDBLite consensus disorder prediction 32 51 - -
Trre9g02671 280 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 59 252 - -
Trre9g02671 280 Gene3D - 63 252 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02671 Trre-Chr9 33579188 33582974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02671 - - tpra:123911032 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02671 9 33579188 33582974 Trre9g02671 9 33579188 33582974 ECH