Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02492 ATGGAGTTTTTCAACAAATCAAAGATTATTAAGCTACGAAGCCACCTAGACAAGTATCTAATCATCGACGACAACCACATCGGAAAACACAAACTCCGTCAAAGCCGAAACGGAACCGTTAGAAGAGCTCAATGGACAATAGAACAACTAGAAAACAATCCTCATCTGATACGGTTAAAAAGCTATAACGGAAAATACTTAACAGCAACAGAAACACCTTTTCCGTTAGGTTTAACGGCAAAAACGGTTATACTAACGGAATTAGAAAACGGTTTAGACGGTAAAAATGAGTGGGAACCAATAAGGGATGGTTTTCAAGTGAAGTTAATGAGTTGGTGTGGGAAGTATTTGAAAGGTAACGGTGGAGCGCCGCCGTGGAGGAATAGTATAACGATTGATGATGCTCTTGGTTCTGTGAAAATGGATTCTGTTCTCTGGGATGTGGAAGATGTGATTGAAGAGAAAATGAATGAAGTGGTTTTTGAGAGGATGTTATCGTCTTTTACTTCTGATGATATTTCTTTTAATTCTGATGCGCCGTCGTCTCCGATGTCGGTTTTTTCGTTGGGGTCGCCGCCGGCGAAAGGGAATTCTCAGACAACAAAACCCAACAAGCTAAGAAGTGGAATGGACTTCTTCTACAGAGCAAAAGCAGTACGTCTTCGTAGTCACCATGACAAATATCTTCTAGCAGAAGAAGATGAAGAATCAGTAACACAAGACAGAAACGGTTCATCAAAAAACGCTAAATGGTTTGTAGAATATGTTCCAAATTACGACAACGTTATCCGTCTAAAAAGCTGTTATGGTAAATACCTCACTGCTTCAGATAATCCTTTTCTTCTAGGAATGACTGGTAGAAAAGTTCTTCAAACACTTCCTAAAACAATTGATTCTTCTGTTGAATGGGAACCTATTAGAGATGGTGTTCGTGTTAAGCTCAAAACAAGATATGGGAATTTTCTTAGAGGAAATGGTGGGTTACCACCTTGGAGGAATACTGTAACTCATGATATTCCTCATAGGACTGTTACTCAAGATTGGATTTTGTGGGATATTGATGTTGTTGAGATTCATGTTAGTAGTAGACATCAACAACAACCTGATGCTCCATCTCTTGAAACAAAGCATTCTCCTGCTGTTGTGGTTCCTAGTGTTTCTGCAGCTAGCTTTTCTAGACAACAGTCGAATGACGATATATCACCTAAGAAGACGGAGGGGCGAATTATATACTACCATGTTGCTGAAGATGATGGAGAAGTGACTGATGAAGGTGTGCAGGGATATTCTATGATTTTCAAAGGGAATGGAGTTGAGGAATTGAGAAACAAGTTTGAGGAAGAGACAGGTTTAGAAGGAATCATCGTATGTAATCGGAGTCCTTTGAATGGAAAACTTTATCCTCTTCGCTTGCAGCTTCCTCCAAATAATGTCACTATGCAAGTTGTTTTAGTTCTTCCTTTCTCAAAAGTGGCAAGAGAGTTGGAGGCACAAGGTTTGCTTTGA 1506 0.3964 MEFFNKSKIIKLRSHLDKYLIIDDNHIGKHKLRQSRNGTVRRAQWTIEQLENNPHLIRLKSYNGKYLTATETPFPLGLTAKTVILTELENGLDGKNEWEPIRDGFQVKLMSWCGKYLKGNGGAPPWRNSITIDDALGSVKMDSVLWDVEDVIEEKMNEVVFERMLSSFTSDDISFNSDAPSSPMSVFSLGSPPAKGNSQTTKPNKLRSGMDFFYRAKAVRLRSHHDKYLLAEEDEESVTQDRNGSSKNAKWFVEYVPNYDNVIRLKSCYGKYLTASDNPFLLGMTGRKVLQTLPKTIDSSVEWEPIRDGVRVKLKTRYGNFLRGNGGLPPWRNTVTHDIPHRTVTQDWILWDIDVVEIHVSSRHQQQPDAPSLETKHSPAVVVPSVSAASFSRQQSNDDISPKKTEGRIIYYHVAEDDGEVTDEGVQGYSMIFKGNGVEELRNKFEEETGLEGIIVCNRSPLNGKLYPLRLQLPPNNVTMQVVLVLPFSKVARELEAQGLL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02492 501 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 210 485 - -
Trre9g02492 501 FunFam BnaC05g19630D protein 214 354 - -
Trre9g02492 501 SUPERFAMILY Actin-crosslinking proteins 214 356 IPR008999 -
Trre9g02492 501 Gene3D - 218 336 - -
Trre9g02492 501 SUPERFAMILY Actin-crosslinking proteins 5 123 IPR008999 -
Trre9g02492 501 Pfam Domain of unknown function (DUF569) 1 146 IPR007679 -
Trre9g02492 501 Pfam Domain of unknown function (DUF569) 210 351 IPR007679 -
Trre9g02492 501 Gene3D - 6 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02492 Trre-Chr9 29671338 29678002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02492 - - gmx:100811752 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02492 9 29671338 29678002 Trre9g02492 9 29671338 29678002 ECH