Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02478 ATGCAGTCTAGCTTCCCTTCATTTCCTCTTCTCACAATTTTCCTTTTCCTACTTCCTTCTTCAATTCAATCTCAAATGTGCCTAAGAAACTGTGGCAAAGAAACTCTCAAGTACCCTTTCGGTAGCGGCCCTGGTTGCGGCGACCCTCGCTTCCATCCACATATAACTTGTAGCCAACAAAAACTCACATTCACAACACACACAGGTTCCTACCCTATAACCTCAATTGACTATTCTAATCAAGTCATATACATTTCAGATCCTACCATGTCAACATGTTCTTGTACTTTACCTAGCAAAGGTTTCGGCTTAGATTGGAATGCACCTTTTTCTTTCGACGATAGCACCATATTTGCTTTAGTAGATTGTTCGATGAACTCATCGTCGATATGCAAAACAAGAAGTTATGATGATGGAAATAATTCTAAGCTTCAATGTGATCAAAATACACAAATTTGTGATGTTATGTATTCTTGTAGACCTAGTAGTATTAATATTAATCTTCCGATTTCGACATGCTGTGTTTATACACCGGTTAATCTTGGTCCATCATTTGATATGGATCTTGATAAGCTTCAATGCAGTTCTTATACAGGTTTTTACAATTACAATGATCAACAAGTTGATCCTCAAAAGTGGAACTATGGAATAGCTCTTAAGTATAAGTTTAGTGTCACAAATGATTATCCTAGCTCATGTGATGCATGTGAAAAGAGTTATGGATTTTGTGGTTATAGTGAAGCTTATAATTCATTTCTATGCAATTGTCCTAATGGAATTAACACCACCACAGATTGTTTCTTCACATCATCTTATAATCATGGTTTTAGAAATGGGGTTGCTTGGTTGACTAATATTGTGGCATGGTCTTTGGTTAGGCTTATGTTGTAA 891 0.3636 MQSSFPSFPLLTIFLFLLPSSIQSQMCLRNCGKETLKYPFGSGPGCGDPRFHPHITCSQQKLTFTTHTGSYPITSIDYSNQVIYISDPTMSTCSCTLPSKGFGLDWNAPFSFDDSTIFALVDCSMNSSSICKTRSYDDGNNSKLQCDQNTQICDVMYSCRPSSININLPISTCCVYTPVNLGPSFDMDLDKLQCSSYTGFYNYNDQQVDPQKWNYGIALKYKFSVTNDYPSSCDACEKSYGFCGYSEAYNSFLCNCPNGINTTTDCFFTSSYNHGFRNGVAWLTNIVAWSLVRLML 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02478 296 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 10 275 - -
Trre9g02478 296 Pfam Wall-associated receptor kinase galacturonan-binding 27 87 IPR025287 GO:0030247
Trre9g02478 296 Pfam Wall-associated receptor kinase C-terminal 206 258 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02478 Trre-Chr9 29446754 29447883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02478 30 124 Receptor kinase-like Gene Family AT5G02070 36.000 1.10e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02478 - - gmx:100788392 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02478 9 29446754 29447883 Trre9g02478 9 29446754 29447883 ECH