Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02395 ATGTCCTCGCGTCGCCACTCGCTCAGCGGTCCTCCTCAACTCACCGGCACACCTTCAACTCACGAACTCCGGCAACGAGTCATTAGCTGTCTCAACAAACTCTCCGACAGAGATACACTCGCCGGGGCCACCGTGGAGCTTGAATCCATCGCTAAATCGCTAAACCATGACTCGTTTTCTTCTTTTCTCTCATGCATTCATAACACTGATGCATCTTCCAAATCACCGGTTCGTAAACAATGTGTTAATCTTTTGAGTCTTCTCTCGCGTTTCCACGGTGATGCTCTTTCTCCTTTTCTTTCTAAAATGATTGCCACTGTTCTCCGTCGGTTGCGAGATCTGGATTCCGTTGTAAGATCTGCCTGTGTCGACGCTGTTGCTGAGATGTCGTCGCGCATTACTCGTCCGGCGTTCTCTGTTGCGTTTCTGAGGCCGTTTATGGACGCGTTAGCGATGGAGCAGGACGCAAATGCGCAGATCGGAGCTGCGTTGTGTCTTGCTGCGGCTGTCGAGGCGGCGCCGGAGCTTGACGTGGAGTCGCTCCGGCGGAATACGCTTCCGAGGCTGGGGAAGCTTCTGAAGACCGATTCGTGTAAGGCGAAGGCGCCGTTGTTGGTGCTGATCGGAAGTCTGGTTGCCGTTGGTGGTGCTTCGAGTCGTGCAGCGATGAACTGGTTGGTTCCGTGTCTTGTGGAGTTCCTCGGAAGTGAGGATTGGACTGTGAGGAAAGCCGCCGCGGAGGCGTTGGGGAAGGTGGCTTCCGTGGAGAAAGATTTGGCGTCACATCATAAGGTTTTGTGTTTGGATTCGTTGCAGAATCGAAGATTTGATAAGGTTAAAGTTGTTAGAGAGACTATGAATCGTTCATTGGATATGTGGAAGGAAGTAAAAGATATTTCTGAAAATGTTCATACTCCGGTTAAATCTGCATGTGCTTCAGTAGGCACTGATGATGGTAAAGGTCAGTGTGTGACCAAAAGTTCACCCTTTGTTGGCTCTAAATCGACCCAACCAAAGAAAACGGTCCCTTCAAGCAGGTCCCCTCCATCTACCGTTTCAGTTTTATCCTCTGGCAAAAAAGGGAGTCTTTTAAAGAGTAATGACAAGGACTCAAGAATGGGGACGTTGTACCAGCGGGATCATGACAAATCATCCGACAACAAGCTTGAAACGCCAGTATCGAAGACCTCCCTTTCAAATACGAGTACAACCAAGGAAGATGATATTAAAAGGTGTGACTTTGAAGCTTCTAAGTCAGCCTCATATCAGAATGCGACAAATTCAAAAGCTGATGTAAAGCAAGTTTTCTATAGCAAAATATCTGACGAGAAATTGCGGAAGTTTGGTGGTTCAAAAGCTCGTGTTGTTCCATGTTCTGATGAAGACCAGCTAGACACAGATGTTACTATCAACAATGCAAATGATGTTTGTGAAAGCCCACAAGATGTTGAGGATTTGTCTTTGATCCGGGAACAGCTTCTTCAAATTGAAAACCAGCAATCAAATCTCTTAGACCTCCTTCAGAGATTTATTGGAACCTCCCAAAACGGGATGAATTCTCTGGAGACACGTGTATATGGTCTAGAGATGGCCTTGGATGAAATATCATATGATTTAGCAGTATCAAGTGGCAGGATTCCCAATAGTGATGCCATAGAAGACATGTGTTGCAAGCTACCTGGAACTGACTTTTTGAGTTCTAAATTCTGGAAGAAGACAGAAAGTCGGTATACAACGCCAAGGTTTTCTTTTGGAAGCTCAGCATCAACTAATCTTGTGCATAATGTAACTGATAGAAATGGAAGCAAAGAAACATTAACTACAAATAGCAAAAAATTTCAGAATCGTAGGGATGAGGGTGGATATATTGTGAACCCATTAGCAGAAACTCAAAGTGATTTGAAGGGCCGTTCAGGGCATCATTCGTATAAAATGTCTAAAAACTTTGTTCAAGATGCTGGGAGTGCACACGGTAACAGTTCCAGCAGATTTGACGGCATTTCATCTAGTGGAGTACTGAGAAGCCAGAATATCAGGTAA 2040 0.4559 MSSRRHSLSGPPQLTGTPSTHELRQRVISCLNKLSDRDTLAGATVELESIAKSLNHDSFSSFLSCIHNTDASSKSPVRKQCVNLLSLLSRFHGDALSPFLSKMIATVLRRLRDLDSVVRSACVDAVAEMSSRITRPAFSVAFLRPFMDALAMEQDANAQIGAALCLAAAVEAAPELDVESLRRNTLPRLGKLLKTDSCKAKAPLLVLIGSLVAVGGASSRAAMNWLVPCLVEFLGSEDWTVRKAAAEALGKVASVEKDLASHHKVLCLDSLQNRRFDKVKVVRETMNRSLDMWKEVKDISENVHTPVKSACASVGTDDGKGQCVTKSSPFVGSKSTQPKKTVPSSRSPPSTVSVLSSGKKGSLLKSNDKDSRMGTLYQRDHDKSSDNKLETPVSKTSLSNTSTTKEDDIKRCDFEASKSASYQNATNSKADVKQVFYSKISDEKLRKFGGSKARVVPCSDEDQLDTDVTINNANDVCESPQDVEDLSLIREQLLQIENQQSNLLDLLQRFIGTSQNGMNSLETRVYGLEMALDEISYDLAVSSGRIPNSDAIEDMCCKLPGTDFLSSKFWKKTESRYTTPRFSFGSSASTNLVHNVTDRNGSKETLTTNSKKFQNRRDEGGYIVNPLAETQSDLKGRSGHHSYKMSKNFVQDAGSAHGNSSSRFDGISSSGVLRSQNIR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02395 679 FunFam ARM repeat superfamily protein 23 213 - -
Trre9g02395 679 Gene3D - 13 357 IPR011989 -
Trre9g02395 679 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 17 660 IPR033337 GO:0005874|GO:0008017
Trre9g02395 679 SUPERFAMILY ARM repeat 20 288 IPR016024 -
Trre9g02395 679 MobiDBLite consensus disorder prediction 363 389 - -
Trre9g02395 679 ProSiteProfiles HEAT repeat profile. 226 264 IPR021133 -
Trre9g02395 679 MobiDBLite consensus disorder prediction 652 679 - -
Trre9g02395 679 MobiDBLite consensus disorder prediction 1 21 - -
Trre9g02395 679 Coils Coil 489 509 - -
Trre9g02395 679 MobiDBLite consensus disorder prediction 599 621 - -
Trre9g02395 679 Pfam HEAT repeats 189 284 - -
Trre9g02395 679 MobiDBLite consensus disorder prediction 312 406 - -
Trre9g02395 679 MobiDBLite consensus disorder prediction 320 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02395 Trre-Chr9 28313454 28319053 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02395 - - tpra:123906851 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02395 9 28313454 28319053 Trre9g02395 9 28313454 28319053 ECH