Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02354 ATGCTTCCTTTACGCTTAACCGTCGTCGTTTCATCTCTTTTTTTCTGTTGCCTTTTCCAACCATTCTGTCTCGGAATCCGTTCTTTCCCAACAACCACCACCACCACCGACACAACCACCGTCCCTAACCCATTTCACTTCTCAGAAGCACCCGATTATCGAAACGGAGCGGGTTGCCCCATACCCGAAAACAACAACAACAACAACATCAAAGGATCATGTGACCCATCATTAGTTCACATCGCAATGACACTCGATTCCGGCTACCTACGTGGCAGCATCGCCGCCGTTCATTCGGTTCTCCGTCACTCATCATGTCCAGAAAACGTTTTCTTTCATTTCATTTCCGCTGAGTTCGACCCAGCGAGTCCACGAGTCTTGACTCGTTTGATATTGTTGTTGTTGATGATATTTTCAAGCTATGGAGTGTAA 432 0.4676 MLPLRLTVVVSSLFFCCLFQPFCLGIRSFPTTTTTTDTTTVPNPFHFSEAPDYRNGAGCPIPENNNNNNIKGSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFISAEFDPASPRVLTRLILLLLMIFSSYGV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02354 143 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 15 120 - -
Trre9g02354 143 SUPERFAMILY Nucleotide-diphospho-sugar transferases 79 133 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02354 Trre-Chr9 27084978 27085587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02354 2 131 Glycosyltransferase AT1G70090 55.970 1.13e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02354 - - psat:127119437 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02354 9 27084978 27085587 Trre9g02354 9 27084978 27085587 ECH