Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02342 ATGGAGTGCGCGGCGAATGGGAGCGGAACACGGTGCATCAACGCCGCAACGACACTCTGTGCACGCTGCGAAGCCGTTGCTTATTGCTCTCTCTCTCATCGGATTGCGCATTGGAGTCATCACAAACATGAGTGTGATAGGTTACAACAACAAATGGAAAGTGTCGATGTTCTCAACGATTTTCCTTTCACTTTCTCTCGCGAATCCACATTTCAGATTTGTGTAAAACAAGAAACTAGGTGTTCATTTTTGAGCAAGAGAGGCCTTCATCAAGTGGGAATGTGGATGCATGAATGCCAATGTGGAGGATCATCTGCTTCATTTAATCTCTTAGGGTTAAACAGTGGCTGGGAGCTCCCGAGTGTTTTGTGTCCTTGTCGTGGTCCTGACTCTCTGGTATCAGAGCAGTTGTGTAGTTGGAGAGACTACTATACATGGAGGTGCATCCCACTACACTCGCCTGTTGTTTTGCCTCTTCAGTGGCCACTTACAATATATCACGCTGCTCAACTTGTTGGAATTACAACCTCGAATCTCGAAGTCAGTGATAAGTTGAACATTCATTACCTTGGACCTGAGAAGGAGATGCTACAACTTGCTGTGTTTGGAGAATTACTTGCCCTCTTCCCCGGTGTACATATTCATATAGAATTCGTTGGACCTGCAATTCCCACTCAAAGGGATGGTGAAAAGATCAGCATTTCTAAGTACCCTTGTTGCAATGAAACCAAGTGTGTGTGCAAACTAGCGGGCGAAAATGTGAGTATGACTTCTGCATTGACATTGCAGCTTTGGCGAGGATTCTATCATGACAGATACACAGATATTGTTAAGGATTCCTTTCCTCACCTAATTATTGCTCCAAATGCTGGCATTGCTGCCTATTCCAGTTGGTTGCCAAGTATTGAGTCAATCGAAAAGATTGACGTCCCAGCGGTTTTTACCGACTATTGCGAGGAAGCTTGTCATCTTGCAGCAAGTTGCATAAAGACTGTAACAGGACGCCCTCTTAGATTACCTGTTCAATTAAATCCTTTCAGGCAGCCTATTGCTGTGGAAGACAGTGTTTTGTTGCTTCCCTGCTACTCAAATTGCTATCTTTTCGGTATGTAA 1113 0.4456 MECAANGSGTRCINAATTLCARCEAVAYCSLSHRIAHWSHHKHECDRLQQQMESVDVLNDFPFTFSRESTFQICVKQETRCSFLSKRGLHQVGMWMHECQCGGSSASFNLLGLNSGWELPSVLCPCRGPDSLVSEQLCSWRDYYTWRCIPLHSPVVLPLQWPLTIYHAAQLVGITTSNLEVSDKLNIHYLGPEKEMLQLAVFGELLALFPGVHIHIEFVGPAIPTQRDGEKISISKYPCCNETKCVCKLAGENVSMTSALTLQLWRGFYHDRYTDIVKDSFPHLIIAPNAGIAAYSSWLPSIESIEKIDVPAVFTDYCEEACHLAASCIKTVTGRPLRLPVQLNPFRQPIAVEDSVLLLPCYSNCYLFGM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02342 370 Gene3D - 2 52 - -
Trre9g02342 370 PANTHER ZINC ION BINDING PROTEIN 2 370 - -
Trre9g02342 370 Pfam MYND finger 12 45 IPR002893 -
Trre9g02342 370 SUPERFAMILY HIT/MYND zinc finger-like 11 51 - -
Trre9g02342 370 Pfam MSS51 C-terminal domain 162 354 IPR046824 -
Trre9g02342 370 ProSiteProfiles Zinc finger MYND-type profile. 9 45 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02342 Trre-Chr9 26979806 26984916 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02342 K24081 - gmx:100808017 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02342 9 26979806 26984916 Trre9g02342 9 26979806 26984916 ECH