Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02189 ATGGAGTTTTCTTCAACACAGAAACTTTGCTTACACTTAATTTCTTCAGCTTATCAGAGATGCCGATTATCGGATCAGATTTGCAGACTCGCAGTTGGTCTCACTCGCTCTTCATCTTCCGATCCTTCTCTTCGAATTTCTATTTCTGATACTGGCATTGGGAGCAGCTTAGAGGAGTTTCAAGATTTGAAAGTTTCTTTCACAAATGTTGCTGACAATTGGGATGGAATGCTTTCTATCAAAACCACTAGTATCAATGATAGCGAGATACATAATTATCAGATAAATCTGAAAGAAAGTGGTTCCTCCAGAATAACCAGACTACCTTCAGACACAAAAAATGGTGCAAAATTCAGTGGCAGTGAAGTTTGCCTCTCTTCTTTTGTTAACCCTGATCTCTTACTGGCTGACATTCATAGCCTCCTAGAGAAGGTGCTGATTCTAAATATTCCTAATATTGCAATTCAATTAGTATCAGAAGATTATGATGTACCTGAATCACGGTATGAAAAGGTTTTTCTTGCAAATACATCCGAGCAGTCACCAATCTCAGCATCAAGTCTTGAACAGCTGCAGTCAGGCCTCGAAGACTATGTACTTAAGCATGGAAATAATTTAAGTAGCAAATGCAATTCTTGCTTCACAAGTTGGGAGGAACTCAAAGTTGGGAGTGGAGTGGCTTGCTGCACTGTAAACCGTCTACACACTGAACTGGTGATGGAAGCGGTCATAGTAATAAGTAATATGTCAATTCAGAACACTATGTGCTTCAGGGAATATGGCGACAAAACTGAGGTTTTGTATTTCAAGGACTTTTCACCATGTGTAATGTCTCAATCATCTATGAAGGCATTGAAAAGCATTGACTGGAAAAGATATGGTTTGCATTTAAGGGATATAGTAGAGCTAGATGGCATTGCATTACTAGAATGGGAAAACTTGCCTACTGATACTCACATTGATATTGTCCTCCACTCATATCTCAAACAATATCCAGCGTTGGACAGATCCTTTTTTGCTTTATCTTGGACAACTGTGATACCCACACCAAGGAAAATGACTCAACTTGATAGAAGCCTTCTTAAAAGAGCTGTTAAACTTTCTCTTGATGACTTGAAGGCTAAGCATTCTGGAGATTTTCTAAGTTCCCGCGCCGTCCAGATTCGCAATCATGCACCTGATCTTGCTCAAACAATTGCCGGACTGATCTTGTCTTCAAGTGACTTAGATTTCCAGAGAGAATGCTTTTCTCTACTTGGATTACAGTCCCAAGATGTTGGAACTGAAATCATGGAAAACAGTATCAAGAAAAAGATTGTTTCAGTTATAGAGATGAATGACAAGGAGTCCGACAAATCTAAAGAAATTGCGCCTTTTCTTTTCGAAGAGAAAGCTCATATCCAGGAACTTGAAGTAGAGTTTCAAGAAAGCGATTACAGTCCCTTGGACCTGGACATGGATATGTTTTAA 1470 0.3918 MEFSSTQKLCLHLISSAYQRCRLSDQICRLAVGLTRSSSSDPSLRISISDTGIGSSLEEFQDLKVSFTNVADNWDGMLSIKTTSINDSEIHNYQINLKESGSSRITRLPSDTKNGAKFSGSEVCLSSFVNPDLLLADIHSLLEKVLILNIPNIAIQLVSEDYDVPESRYEKVFLANTSEQSPISASSLEQLQSGLEDYVLKHGNNLSSKCNSCFTSWEELKVGSGVACCTVNRLHTELVMEAVIVISNMSIQNTMCFREYGDKTEVLYFKDFSPCVMSQSSMKALKSIDWKRYGLHLRDIVELDGIALLEWENLPTDTHIDIVLHSYLKQYPALDRSFFALSWTTVIPTPRKMTQLDRSLLKRAVKLSLDDLKAKHSGDFLSSRAVQIRNHAPDLAQTIAGLILSSSDLDFQRECFSLLGLQSQDVGTEIMENSIKKKIVSVIEMNDKESDKSKEIAPFLFEEKAHIQELEVEFQESDYSPLDLDMDMF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02189 489 PANTHER TYPE 2 DNA TOPOISOMERASE 6 SUBUNIT B-LIKE 4 487 IPR034566 GO:0042138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02189 Trre-Chr9 23513129 23518956 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02189 - - mtr:11413525 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02189 9 23513129 23518956 Trre9g02189 9 23513129 23518956 ECH