Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01992 ATGTCGACGGCATTTCCTTCCTCCACATTCCGACCACCATCCATCCGCTGCTCCAACGATCGCCAGGCGCTTTTTAACCGCATCGCTCCTGTCTATGATAACTTGAATGATCTGCTGAGCTTAGGTCAGCACCGAATTTGGAAGCGAATGGCAGTTTCTTGGACTGAAGCAAAAATGGGTGACCGTGTGTTGGATGTGTGCTGTGGAAGTGGTGATTTAGCTTTTCTCTTGTCCAACAAAGTTGCCTCCGATGGCAAGGTGATTGGTCTTGATTTCTCAAAGGAACAGTTAATGGTCGCCTCGTCACGGTCATTTTCAAAGAATTGCTTCAAGAATATTGAGTGGGTTGAAGGCGATGCTCTTGCCTTACCATTTGCTGATAATTACTTTGATGCCATCACTATGGGCTATGGTCTACGAAATGTTGTTGATAAGCGTAAAGCCATGCAGGAAATTTTACGTGTGCTTAAACCTGGTTCCAATGTGTCGATCCTTGACTTCAATAAAAGCAATGAGCTACTAACTTCTTCAATTACGGAGTGGATGATTGATAATATTGTTGTCCCTGTTGCCTCTGGTTATGGCCTTTCAGAAGACTACAGATATCTCAAGAGGTCAATAAGAGAATTTTTAACAGGGAAGGAATTGGAGAAACTTGCTTTAGAAGTAGGATTTTCAACGGCCCGACATTATGAGATTGGTGGAGGCCTCATGGGGTGCTTGGTAGCTAAAAGTTAG 738 0.439 MSTAFPSSTFRPPSIRCSNDRQALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWTEAKMGDRVLDVCCGSGDLAFLLSNKVASDGKVIGLDFSKEQLMVASSRSFSKNCFKNIEWVEGDALALPFADNYFDAITMGYGLRNVVDKRKAMQEILRVLKPGSNVSILDFNKSNELLTSSITEWMIDNIVVPVASGYGLSEDYRYLKRSIREFLTGKELEKLALEVGFSTARHYEIGGGLMGCLVAKS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01992 245 Pfam ubiE/COQ5 methyltransferase family 22 239 - -
Trre9g01992 245 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 245 IPR004033 GO:0008168
Trre9g01992 245 PANTHER METHYLTRANSFERASE 30 227 - -
Trre9g01992 245 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 32 47 IPR023576 GO:0008168
Trre9g01992 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 236 IPR029063 -
Trre9g01992 245 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 20 245 IPR032904 GO:0042372|GO:0052624
Trre9g01992 245 CDD AdoMet_MTases 62 159 - -
Trre9g01992 245 Gene3D Vaccinia Virus protein VP39 27 244 IPR029063 -
Trre9g01992 245 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 10 245 IPR004033 GO:0008168
Trre9g01992 245 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 23 244 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01992 Trre-Chr9 19842004 19850449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01992 52 182 Acyl Lipid Metabolism Gene Families AT1G48600 29.008 3.56e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01992 K23095 - gmx:100789470 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01992 9 19842004 19850449 Trre9g01992 9 19842004 19850449 ECH