Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01823 ATGGAACCAAATGTCGCAAAAGCATTGGATGGAGCTTCATTAAATCTGAAGCGAAAGCGGGCCACCCAATGTGTTGCACATCTGACTGGAGCTTCGGCGCCAACAAACTTGGTTATAAAAAAAATGAGATTGGTCGGCAATGAAGGCCAACCGACTGACTCTGGTCCTGGTATTTCAAGGTCCTTGGTAAGGTATTATTTGAACTATAAGAAAAGTGGATTGCCCAAACGTTTGATGTTCTATAAGAACGGTGAATGGTTTGACTATCCTAAGGATGTTGTTTACTTGGTTAAGAAAGATTTCGAAATCAAGAAGGCAGCTGTGGAAGTAGAGTTAGATGGCCAGGATCTTGTGCTAGATTTTTTGCATATGTATAGTGTGAACTTGAAAACGGGTTTGCGACAACCCATTGCTTGGATTGATGAGGCAGGGGGCTGCTTTTTCCCTGAAGTGTTTGCTGGTTTTGATGAAGAACCCAATAATTTAGGCGAGCAGGAGGGTGAAGAAAGTCACGATGCCAAAGAGCCACATGAAATAAAACTACATTTATCAATTGAAATAAATGGGGCGGATGAATCCAAGTTGGGGGAGTATAGTGGGGAGTCTAATGCTGTTGCTAAGGTTGTAGAAGCTGACGATCATGATAGCATGAATAAAATGGGCATTAAAAATGTTGTTGCAGCTATAAGGCAAGAACAAAACGTAGACTTAGATGCTCACACTGAATCTGCATATGGAAAACTGGATGTGGATTCTGTACAGAAGATGTTTCTTACAGGAATGACTACTTTGGGCGTTACTAACGCTGACATAGTTGAGATTTACCGCAGCTCAGACATTTCAATGCAAGCGCGACTGGAGTTATTTCAGAAGCAAGCTGAAATCACAAAGGGAGTTCAGGGGGATGCTAATGTTCGGTATGCATGGCTTGCTTGTTCTAAAGAGGAACTGTCTACAATGATGGAGTATGGGCTTGGTCACAATGGACTATCTGCATCCAAATGCATATATGGTGTTGGTGTTCATCTTGCTGCTGTTAGCCACCCTTATGCCTGTGCACCTTATTGTGATGTTGACGAAAATGGGATTAAGCATTTGGTTCTTTGCCGTGTCATAATGGGAAACATGGAGCTTCTTCGTCCTGGCAGTGATCAGCTTCGTCCCAGTGATTGCAAATATGATAATGGAGTGGATGACATTCAGTACCCAAAATACTATGTAGTTTGGAATATGAATATCAACACTCATATCTATCCAGAATTCGTTGTCAGCTTCAAGGCCCCTTTGGATGCTGAAGGAAATGTTGGTTCAAATGAGAGTAAGAAGAATGATTCTCGGGATTCTACAGTGGACACTGGAAAAGCTGCCAGTGTGCCTGCTAACACCCGAAGAACTCCGAAATCCCCTTGGCTGCCGTTTCCCATGCTTTTTGCTGCCATCAGAAACAGGGTTCCTCCCCATGTTATGTTTCTTATCAGAGCCCATTATGCAGAGTTGACGTCAAAGAAGATTTCCCGTGATGATTTCGTGATGAAGCTGAGGTTAATTGTTGGAGATAATCTACTGAGATCTATAATAACTAACATTCGATCAAAGGGACCAGATGGTGAATCGATCGCCTTAAACATTAAGCAAGTGTGA 1641 0.4247 MEPNVAKALDGASLNLKRKRATQCVAHLTGASAPTNLVIKKMRLVGNEGQPTDSGPGISRSLVRYYLNYKKSGLPKRLMFYKNGEWFDYPKDVVYLVKKDFEIKKAAVEVELDGQDLVLDFLHMYSVNLKTGLRQPIAWIDEAGGCFFPEVFAGFDEEPNNLGEQEGEESHDAKEPHEIKLHLSIEINGADESKLGEYSGESNAVAKVVEADDHDSMNKMGIKNVVAAIRQEQNVDLDAHTESAYGKLDVDSVQKMFLTGMTTLGVTNADIVEIYRSSDISMQARLELFQKQAEITKGVQGDANVRYAWLACSKEELSTMMEYGLGHNGLSASKCIYGVGVHLAAVSHPYACAPYCDVDENGIKHLVLCRVIMGNMELLRPGSDQLRPSDCKYDNGVDDIQYPKYYVVWNMNINTHIYPEFVVSFKAPLDAEGNVGSNESKKNDSRDSTVDTGKAASVPANTRRTPKSPWLPFPMLFAAIRNRVPPHVMFLIRAHYAELTSKKISRDDFVMKLRLIVGDNLLRSIITNIRSKGPDGESIALNIKQV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01823 546 MobiDBLite consensus disorder prediction 434 463 - -
Trre9g01823 546 ProSiteProfiles WWE domain profile. 64 139 IPR004170 -
Trre9g01823 546 ProSiteProfiles RST domain profile. 464 535 IPR022003 -
Trre9g01823 546 Gene3D - 245 427 - -
Trre9g01823 546 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 57 532 IPR044964 -
Trre9g01823 546 Pfam RCD1-SRO-TAF4 (RST) plant domain 466 530 IPR022003 -
Trre9g01823 546 ProSiteProfiles PARP catalytic domain profile. 223 446 IPR012317 GO:0003950
Trre9g01823 546 SUPERFAMILY ADP-ribosylation 252 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01823 Trre-Chr9 17308371 17311303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01823 - - mtr:11416324 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01823 9 17308371 17311303 Trre9g01823 9 17308371 17311303 ECH