Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01809 ATGACCGATTCTTTCGTTCACTATGCGTCACACAATTATTACCGCCACAAAAACAAGAAAACTATGTTCATCTCTTCTACACCGTTTTCTTCTCCTTCAACCGCATTTTTCTCACCGCCTAAACCTCTTCTTCGTTCTACTTTTTATCTTCGATCTTCAACTTCTACTTCTTCTGTTACTTCCACTTCTTATTCCAATCTTGCTTTCAATATTAAACCTAAAGATAGTAAAACCGTTGTTTCTGCTAATATGATTTCTTCTGTTTCTTCTCGCACTTTCCTCAATGCTCAAAATGAACAAGATGTTCTTTCTGGAATAAAGAAGGAAGTCGATGCGGGAACTTTGCCTCCCAGTATTGCTGCTGGTATGGAAGACTTGTATCTTAACTATAAAAGTGCAGTTATTAAAAGTGGAGATCCCAAAGCAGATGAGGTTGTATTGTCAAATATGACTGCTTTATTAGATCGCATATTTTTGGATGTGAAGGAGCCTTTTGTCTTTGATGCACACCACAAAGCCAAGAGAGAGCCTTTTGACTACTACATGTTTGGTCAAAATTATATCCGTCCCTTAGTTGATTTCAACACTTCTTACGTTGGCAACATGCCCCTTTTCATTCAAATGGAAGAACAACTTAAGCAGGGACACAATATTATCTTGATGTCAAACCACCAAACTGAAGCAGATCCGGCTATTATTTCACTGCTGCTTGAATTGCGACTTCCATATATTGCTGAAAACTTGATTTATGTAGCAGGAGATAGAGTTATAACAGATCCTCTATGCAAGCCCTTTAGTATTGGCAGGAATCTTATATGTGTTTATTCGAAAAAGCACATGCTTGATGATCCAGAACTTGTAGAGATGAAAAGAAAAGCAAATACACGAAGTCTGAAGGAATTGGCTACGCTTTTAAGGAGTGGATCACAAATAATTTGGATTGCCCCAAGCGGCGGTAGGGATCGACCAGTTGCCAACTCTGGGGAATGGGAACCGGCACCCTTTGATCCTTCTTCAGTGGATAATATGCGAAGACTTGTCGATCATTCAGGTCCCCCTGGTCATATCTATCCTTTGGCAATATTGTGCCATGACATAATGCCCCCTCCACTTAAGGTCGAAAAAGAAATTGGGGAGAAAAGAATCATATCCTATCACGGGACTGGTATATCAGTTGCTCCAGAAGTAAGCTTTTCCAACGCCACTGCTGCTTGTGAAAATCCTGAAAAGGCTAAGGAAGCATACTCAAAAGCCTTGTATGATTCTGTGACTAATCAATATGATGTGCTGAAGTCTGCCATACACGGCAAAAAAGGATTACAAGCATCAACTCCTGTAGTTTCTTTGTCACAGCCATGGAAGTAG 1365 0.4 MTDSFVHYASHNYYRHKNKKTMFISSTPFSSPSTAFFSPPKPLLRSTFYLRSSTSTSSVTSTSYSNLAFNIKPKDSKTVVSANMISSVSSRTFLNAQNEQDVLSGIKKEVDAGTLPPSIAAGMEDLYLNYKSAVIKSGDPKADEVVLSNMTALLDRIFLDVKEPFVFDAHHKAKREPFDYYMFGQNYIRPLVDFNTSYVGNMPLFIQMEEQLKQGHNIILMSNHQTEADPAIISLLLELRLPYIAENLIYVAGDRVITDPLCKPFSIGRNLICVYSKKHMLDDPELVEMKRKANTRSLKELATLLRSGSQIIWIAPSGGRDRPVANSGEWEPAPFDPSSVDNMRRLVDHSGPPGHIYPLAILCHDIMPPPLKVEKEIGEKRIISYHGTGISVAPEVSFSNATAACENPEKAKEAYSKALYDSVTNQYDVLKSAIHGKKGLQASTPVVSLSQPWK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01809 454 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 34 454 IPR016222 GO:0004366|GO:0006650
Trre9g01809 454 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 90 453 - -
Trre9g01809 454 SMART plsc_2 218 364 IPR002123 GO:0016746
Trre9g01809 454 CDD LPLAT_GPAT 197 430 - -
Trre9g01809 454 Pfam Glycerol-3-phosphate acyltransferase N-terminal 90 165 IPR023083 GO:0004366
Trre9g01809 454 PIRSF G3POAT 2 454 IPR016222 GO:0004366|GO:0006650
Trre9g01809 454 Gene3D - 88 163 IPR038114 -
Trre9g01809 454 Gene3D - 164 445 - -
Trre9g01809 454 Pfam Acyltransferase 207 361 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01809 Trre-Chr9 17038045 17045180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01809 90 453 Acyl Lipid Metabolism Gene Families AT1G32200 68.956 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01809 K00630 - ag:CAA41769 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01809 9 17038045 17045180 Trre9g01809 9 17038045 17045180 ECH