Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01711 ATGAATCGCCACCACGATCCCAATCCATTCGAGGAAGAAGAAGTCAATCCATTCTCGAATGGTGCTGGATCAAAATCACGTGTTCCACCTTTGGCATCTGAACCATTAGGCTTTGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACTTCCAATGGGGATTCCAAGAAAAAAGGTCAAGAGTTAGCAGTGTGGGAAGCCGAATTAAAAAGAAGAGAGAAGGAAATAAAAAGACGAGAAGATTCTGTTGCTAAAGCTGGTGTGCCCGTTGATGATAAGAATTGGCCTCCATTTTTCCCAATCATTCACCATGATATTGCCAATGAGATTCCAGTTCATGCTCAGAGGCTGCAATATTCGGCCTTTGCAAGTTGGTTGGGAATTGTTCTCTGCTTAGTTTTTAATTTAGTTGCTGTGATTGTCTGTTGGATCAGAGGCGGGGGTGTTAAAATATTTTTCCTTGCGGTGATTTATGCGCTGCTTGGGGTTCCCCTTTCATATGTGCTTTGGTACAGGCCCCTCTATCGCGCTATGAGGACGGATAGTGCACTGAAGTTCAGTTGGTTTTTCATGTTCTACTTGCTTCATATAGCATTTTGTATCTTTGCTGCAATTGCGCCTCCAATTGTTTTTCATGGAAAGTCATTAACGGGCATCCTTGCAGCAATTGATGTGTTCTCAGACCACGTATTGGTTGGGATATTCTATTTGGTTGGATTTGGCCTGTTTTGCTTGGAGGCTCTTCTAAGCTTGTGGGTAATTCAGAAAATATACATGTTTTTCCGAGGGCACAAGTGA 804 0.4254 MNRHHDPNPFEEEEVNPFSNGAGSKSRVPPLASEPLGFGQRHDATVDIPLDTSNGDSKKKGQELAVWEAELKRREKEIKRREDSVAKAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYSAFASWLGIVLCLVFNLVAVIVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFSWFFMFYLLHIAFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFGLFCLEALLSLWVIQKIYMFFRGHK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01711 267 MobiDBLite consensus disorder prediction 1 61 - -
Trre9g01711 267 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 266 IPR007273 GO:0015031|GO:0016020
Trre9g01711 267 Pfam SCAMP family 95 265 IPR007273 GO:0015031|GO:0016020
Trre9g01711 267 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01711 Trre-Chr9 15289334 15295569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01711 1 267 Miscellaneous Gene Families AT1G32050 75.093 3.50e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01711 K19995 - gmx:100780723 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01711 9 15289334 15295569 Trre9g01711 9 15289334 15295569 ECH