Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01656 ATGGGGGAGTTCACCGGTAGCGGGAGTGAGTATGTGGCCGTAGGTGAATCGTCTTCCCCGAGAACAAATCACATGAGGAAAGTTTCAGTTCTACCGCTTGTGTTTCTTATCTTCTATGAGGTATCAGGAGGACCTTTTGGTGTTGAGGATACTGTGAAAGCAGCGGGTCCTTTGTTAGCCTTACTTGGATTTTTGGTTTTTCCGTTTATATGGAGTGTTCCAGAAGCTTTGATTACTGCCGAGATGGGTACCATGTTCCCTGAAAATAGTGGTTATGTTGTGTGGGTGTCGTCTGCTTTGGGTCCTTTTTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTTAGTGGCGTGATTGATAATGCTTTGTATCCAGTTCTGTTTCTTGATTATCTTAAGTCAGCAATTCCGGCTGTTGGTGGTGGTTTAACTAGAGTATTTGCAACGTGGGGTTTGACTATAGTTCTTACTTATTTGAACTATAGGGGTTTAACTATTGTTGGACTTGTTGCTGTTTGTTTAGGGATTTTCTCGCTTCTCCCATTTGTTTTCATGGGGTTGTTGTCGATTCCAGACATGAAACCTGCAAGATGGTTGGAGACTACTAATCTAAATGATGTTGATTGGAATTTGTATTTGAATACTCTATTTTGGAATCTCAATTATTGGGACTCCATAAGCACTCTTGCTGGTGAAGTTGAGAATCCGAAGAAAAACCTTCCCAAAGGTTTGTTTTATGCTTTGATCCTGGTTGTTGTGGCGTACTTCTTTCCTCTTCTGATAGGTACTGGTGCTGTTCCGGTTCAGCGCGAGTTGTGGACTGACGGGTACTTCTCCGATATTGCAATGATCATTGGAGGAGTGTGGTTGAGATGGTGGCTTCAGGCTGCAGCTGCAATGTCAAACATGGGAATGTTCGTTGCTGAAATGAGTAGCGACTCTTTTCAGCTTCTTGGAATGGCCGAGAGGGGAATGTTGCCGGAGTTTTTCACCAAGAGGTCTCGTCACGGAACGCCTCTAATAGGTATACTTTTTTCGGCCTCAGGTGTGATTTTACTTTCATGGCTTAGTTTTCAAGAAATTGTAGCTGCAGAGAATTTCTTGTACTGTATTGGGATGATTCTGGAGTTTATCGCGTTCATATTGTTGAAGATCAAACACCCCAATGCACCTCGGCCTTACAAAGTACCAGGGGGAACAGCTGGAGCAATTATTATGTGCATCCCTCCAACAATATTGATCTGTGTGGTATTAGCTTTCTCCTCCCTCAAAGTATTTATTATAAGCCTCGTTGCTATGTCGATTGGTCTTGTGATGCAGCCTTGTCTCAAATTTATGGAGAAAAAGAGATGGATGAAGTTCTCACATAGTCCCGAGCTACTTGATATTGTCAATGGAGAGGACACTGAATCTTTGGTACAATAA 1422 0.429 MGEFTGSGSEYVAVGESSSPRTNHMRKVSVLPLVFLIFYEVSGGPFGVEDTVKAAGPLLALLGFLVFPFIWSVPEALITAEMGTMFPENSGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAIPAVGGGLTRVFATWGLTIVLTYLNYRGLTIVGLVAVCLGIFSLLPFVFMGLLSIPDMKPARWLETTNLNDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKNLPKGLFYALILVVVAYFFPLLIGTGAVPVQRELWTDGYFSDIAMIIGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFTKRSRHGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCIGMILEFIAFILLKIKHPNAPRPYKVPGGTAGAIIMCIPPTILICVVLAFSSLKVFIISLVAMSIGLVMQPCLKFMEKKRWMKFSHSPELLDIVNGEDTESLVQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01656 473 PANTHER POLYAMINE TRANSPORTER PUT1 18 462 IPR044566 GO:0022857
Trre9g01656 473 MobiDBLite consensus disorder prediction 1 20 - -
Trre9g01656 473 Pfam Amino acid permease 38 424 IPR002293 GO:0016020|GO:0022857|GO:0055085
Trre9g01656 473 Gene3D Amino acid/polyamine transporter I 24 456 - -
Trre9g01656 473 PIRSF AA_transporter 5 472 - -
Trre9g01656 473 FunFam Amino acid permease, putative 24 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01656 Trre-Chr9 14493200 14494621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01656 1 473 Organic Solute Cotransporters AT1G31830 71.667 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01656 - - gmx:100816567 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01656 9 14493200 14494621 Trre9g01656 9 14493200 14494621 ECH