Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01654 ATGGGTTTGCAGGAAGATTTTGAGGAGCATGCTGCAAAAGTCAAGACTCTGAAAGAGAGCCCATCAAATGAAGACTTGCTTATCCTTTATGGATTGTATAAGCAAGCCACTGTTGGACCTGTCGACACCAGTCGTCCTGGAATATTCAACATGAGGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGCGAAATCCAAGGAGGAAGCAATGGGCGATTACATCACTAAGGCCAAGGGGCAGTACTTGTGCGACAAGTAG 264 0.4659 MGLQEDFEEHAAKVKTLKESPSNEDLLILYGLYKQATVGPVDTSRPGIFNMRDRAKWDAWKAVEAKSKEEAMGDYITKAKGQYLCDK 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01654 87 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Trre9g01654 87 Gene3D - 1 83 IPR014352 -
Trre9g01654 87 FunFam Acyl-CoA-binding domain-containing protein 5 2 85 - -
Trre9g01654 87 Pfam Acyl CoA binding protein 4 78 IPR000582 GO:0000062
Trre9g01654 87 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Trre9g01654 87 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Trre9g01654 87 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Trre9g01654 87 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Trre9g01654 87 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 2 80 - -
Trre9g01654 87 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 87 IPR000582 GO:0000062
Trre9g01654 87 CDD ACBP 3 87 IPR000582 GO:0000062
Trre9g01654 87 SUPERFAMILY Acyl-CoA binding protein 3 80 IPR035984 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01654 Trre-Chr9 14469907 14472593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01654 1 80 Acyl Lipid Metabolism Gene Families AT1G31812 80.000 7.53e-45 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01654 K08762 - zju:107430963 147.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01654 9 14469907 14472593 Trre9g01654 9 14469907 14472593 ECH