Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01627 ATGGCTTCTTCATCACAGTGTCCACCCTTTGAATTTTCAAGCAAATACTATCATGTGTCTGAAAATGGAGGTGGCTGTGTTAGACAAACAAGTTTCTTTGAAGGCAAACATATCCTTAATCAAGGAGTTGGCTATTCTGTCATTCTTGGTTTTGGTGCTTTCTTTGCTCTCTTCACCTCTTTCTTGGTATGGCTGGAGAAGAGGTATGTCGGGTCTCGCCACACCTCTGAATGGTTCAATACAGCAGGAAGAAATGTTAAGACAGGACTCATTGCTAGTGTCATTGTCTCTCAGTGGACTTGGGCTGCTACAATCCTACAAAGCTCTAATGTTGCTTGGGAATATGGGGTTAGTGGACCTTTCTGGTATGCTAGTGGAGCTACCATCCAGGTAATGTTGTTTGGAGTCATGGCTATAGAGATTAAAAGAAAGGCTCCTTATGCTCATACTGTGTGTGAAATCGTCAAAGCCCGTTGGGGAACTTCAGCACACATTGTATTCCTTTTCTTCTGCTTCATGACAAATATAATTGTAACGGCTATGTTACTTCTTGGTGGTTCCGCGGTTGTGAATGCATTAACCGGAGTCAACATTTATGCTGCTAGTTTTCTAATACCACTTGGAGTAATTGTATATACACTAGCTGGTGGATTAAAAGCCACATTTTTAGCAAGCTATATACATTCTGTCATAGTGCACGTTGTTTTGGTCATTTTTGTCTACCTTGTCTATACTTCTAGCAGCGAACTTGGTAGTCCGAGTGTCGTTTACAATCGCTTGCTCGAGGTTGCAAGCAAATCAAGAATATGTCAAGATCCTATATCACACCATGGACAATCTTGTGGTCCTGTCAGTGGAAATCATAAAGGCTCATACCTAACAATGCTTAGTTCAGGTGGTTTAGTTTTTGGAATTATCAACATTGTTGGCAACTTTGGCACAGTGTTTGTTGACAATGGATATTGGGTGAGTGCTATTGCAGCAAGGCCTTCATCAACTCATAAGGGATACTTGTTGGGAGGTTTGGTCTGGTTTGCAGTGCCATTTTCTTTGGCTACATCACTTGGTTTGGGAGCACTAGCCCTTGATTTACCTCTAAATGAAAGTGAGGCAGGTCGTGGACTAGTTCCTCCGGCTACTGCTGTAGCTTTGATGGGAAAAGGTGGATCAATTCTTCTTCTTACCATGCTTTTTATGGCAGTGACTTCTGCTGGTTCATCAGAGCTGATTGCGGTGTCCTCATTATGCACATATGACATCTACAGAACTTACATAAACCCTAATGCGAGTGGAAAGAAAATCCTCAAAGTATCAAGAATGGTTGTCCTAGGTTTTGGATGTTTCATGGGATTGTTAGCAGTTATACTAAACAAAGCAGGAGTTTCTTTAGGATGGATGTACCTTGCAATGGGTGTTTTGATTGGTTCAGCAGTTATTCCTATTGCTTTCATGCTTCTCTGGAGAAAAGCAAATGCAATTGGAGCTATTCTTGGAACAATATTTGGTTGTGTTCTTGGAATAATCACATGGTTATCTGTTACAAAAATAGAGTATGGAAAGATAAATCTTGATACAAGTGGAAGAAATGCACCAATGCTTGCCGGAAATCTTGTTTCGATATTAACCGGAGGAATTGTTCATGCTGTTTGTAGTATATTATGGCCTCAGAACTATGATTGGAGTACCACTAAGCAAATCACTGTGGTTGAAAAGGAAAAGACTGATTTACCAGTTGAAGAGTTTAAAGAAGAAAAGTTAATAAGTGCTAAAGTATGGATAGTGAAATGGGGTATTGGTTTCACTGTTTTGATAGTTATACTATGGCCTATTCTTTCCCTCCCTGCAGGGGAGTTCAGCAAAGGGTACTTCTATTTCTGGGCAGTGATTGCTATAGGATGGGGTACAATAGGTTCTGCTGTGATAATTGCTTTACCAATAATAGAGAGTTGGGATACAATCCAAACTGTTATTCTAGGAATGTTTACAAATGACAGACTCATGGAAAAGGTGGAAGAGTTAAATTTAAAGTTGCATACAATCATACAGGCAATTCCAGAAGCAGAAAGACTTTACTTGCTGGAGAAGGAAAAAGCCAAAAAATCAGAAGCCTCAGAATCAGAACAACAATCTTTTTCACTTCCTATGTAA 2148 0.3999 MASSSQCPPFEFSSKYYHVSENGGGCVRQTSFFEGKHILNQGVGYSVILGFGAFFALFTSFLVWLEKRYVGSRHTSEWFNTAGRNVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVMLFGVMAIEIKRKAPYAHTVCEIVKARWGTSAHIVFLFFCFMTNIIVTAMLLLGGSAVVNALTGVNIYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHVVLVIFVYLVYTSSSELGSPSVVYNRLLEVASKSRICQDPISHHGQSCGPVSGNHKGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPLNESEAGRGLVPPATAVALMGKGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKKILKVSRMVVLGFGCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVIPIAFMLLWRKANAIGAILGTIFGCVLGIITWLSVTKIEYGKINLDTSGRNAPMLAGNLVSILTGGIVHAVCSILWPQNYDWSTTKQITVVEKEKTDLPVEEFKEEKLISAKVWIVKWGIGFTVLIVILWPILSLPAGEFSKGYFYFWAVIAIGWGTIGSAVIIALPIIESWDTIQTVILGMFTNDRLMEKVEELNLKLHTIIQAIPEAERLYLLEKEKAKKSEASESEQQSFSLPM 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01627 715 Pfam Sodium:solute symporter family 80 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Trre9g01627 715 ProSiteProfiles Sodium:solute symporter family profile. 44 516 IPR001734 GO:0016020|GO:0022857|GO:0055085
Trre9g01627 715 NCBIfam sodium/solute symporter 79 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Trre9g01627 715 CDD SLC5sbd_DUR3 45 554 - -
Trre9g01627 715 FunFam Urea active transporter 67 577 - -
Trre9g01627 715 Coils Coil 663 683 - -
Trre9g01627 715 Gene3D Sodium/glucose cotransporter 68 619 IPR038377 -
Trre9g01627 715 PANTHER - 15 701 IPR031155 GO:0015204|GO:0016020|GO:0071918
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01627 Trre-Chr9 14204255 14208930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01627 5 702 Organic Solute Cotransporters AT5G45380 78.236 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01627 K20989 - gmx:100784391 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01627 9 14204255 14208930 Trre9g01627 9 14204255 14208930 ECH