Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01625 ATGATGAGACAACAAGGTGGTATGAACACTGCAATGTTTTTGACAAAGAAGGGTTTGTTAGGTGCTGCTGAAGTTCCTAACAAATGGGGTTCTTTGGTTAGAGGAGTTCCTCTTCTTAGGAATGGAAGCACTTTTGCTGCTAATCTTTCAGATCAGAAAGATGACAACAAGACTCCTCCTTCTTCTAAGGGTAGTGCTGGTGCTGGTGCTGGTGGGAATAAAGATGAAAAAGGTATTATGAGTTATTGGGGTATTCAGCCTTCTAAGATCACTAAACAAGATGGTACTGAATGGAAGTGGAATTGCTTCAGGCCATGGGAGACATACAAAGCAGATGTTACTATTGATCTGACTAAACATCACAAACCAACAACTTTTCTGGACAAGATGGCTTATTGGACTGTTAAGAGTCTTAGGTACCCAACTGATATCTTTTTTCAGAGAAGGTATGGATGCCGAGCAATGATGCTTGAGACAGTAGCAGCTGTTCCTGGCATGGTGGGAGGAATGCTACTTCATTGCAAATCATTGCGCCGATTTGAGCACAGTGGTGGATGGATCAAAGCATTGCTAGAAGAAGCAGAGAATGAAAGGATGCACCTAATGACTTTCATGGAAGTAGCAAAACCGAGATGGTATGAGCGTGCTCTAGTCATAACCGTCCAAGGTGTTTTCTTCAATGCTTATTTCTTAGGCTATTTGATCTCACCCAAATTTGCACACCGTATGGTTGGTTACCTTGAGGAAGAAGCTATTCACTCATACACTGAGTTTCTCAAGGAGCTTGATAAAGGCAATATAGAAAATGTTCCTGCTCCAGCCATTGCTATTGACTATTGGCAGCTTCCCCCAAATTCTACTTTAAGGGATGTTGTTATGGTTGTCAGAGCTGATGAAGCACATCATCGCGATGTCAACCACTTTGCATCAGATATCCATTACCAAGGAAGAGAGTTAAGAGAGGCTGCTGCTCCAATTGGTTATCACTAG 990 0.4222 MMRQQGGMNTAMFLTKKGLLGAAEVPNKWGSLVRGVPLLRNGSTFAANLSDQKDDNKTPPSSKGSAGAGAGGNKDEKGIMSYWGIQPSKITKQDGTEWKWNCFRPWETYKADVTIDLTKHHKPTTFLDKMAYWTVKSLRYPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPRWYERALVITVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPPNSTLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01625 329 MobiDBLite consensus disorder prediction 47 73 - -
Trre9g01625 329 FunFam Ubiquinol oxidase 82 326 - -
Trre9g01625 329 MobiDBLite consensus disorder prediction 47 63 - -
Trre9g01625 329 Pfam Alternative oxidase 118 309 IPR002680 GO:0009916
Trre9g01625 329 Gene3D Alternative oxidase 80 325 IPR038659 -
Trre9g01625 329 CDD AOX 146 313 IPR002680 GO:0009916
Trre9g01625 329 PANTHER ALTERNATIVE OXIDASE 56 329 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01625 Trre-Chr9 14175026 14176991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01625 52 329 Miscellaneous Gene Families AT3G22370 86.022 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01625 K17893 - gmx:547924 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01625 9 14175026 14176991 Trre9g01625 9 14175026 14176991 ECH