Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01587 ATGCTAAAAGCTCTTGCTGCAATACCTCCTTCAATCTCCTCCATAACTAGTGTTGCGAGGAAAATGAGCACTTCACCAACACCACCAATACATCCCAAATTCATTTCTGTTGAAGCCGCTGATATACATTCCAGAACTAAATCTGACGGTTTCAGATTCAGCTTTGTCTCCTATAACATATTGGCTCAGGTTTATGTGAAGAGTGCTTTTTTCCCACACTCACCTCCTTTGTCTCTCAAATGGAAACATCGTTCAAACTCGATTTTGGAAGTTCTTAAGAACTTGGGAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAAAATGCAGGAGCTGGGATATTCTTCTATTTATATGAAGAGAAGTGGAGAGAGAAAGCGTGATGGGTGTGGCTTATTTTACAAGCATGACCGTGCAGAGTTGGTCTTAGAAGAAAAAATTGAATACAATGATCTTGTTAAGTCAATTCAAGACGGGAACTCTTCAAATGATGATGAACACAGCAATGTCCAGACAACCCAGCCAGATAAACAAAAGGATGATACGACCAAAAGTGGACCTAAATCGGGTGCAGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAACGTGACTGTGTTGGAATTTTGGCTGCATTCAAATTCAAAGGTCCCTCTCATCAATTTCTTATTGTAGCCAACACACATATTTATTGGGATCCTGAGTGGGCTGATGTCAAACTTGCACAAGCTAAATATCTTCTATCTCGTTTGGCACAATTCAAAACACTGGTATCGGATAAATACGAATGCATACCTGAAGTGATTGTGGCCGGTGATTTCAACTCTCAGCCAGGAGATATGGTTTATCAGTACCTTGTATCAGGCAACCCATCATCAGAACTGACGACTGATTATGTAGAGGAGCGTCCAATTCCTCTAACTAGTGTCTATGCTTCTACAAGAGGAGAGCCTCCATTTACAAATTACACACCTGGTTTCACTGGAACACTCGATTATATATTATTTTTCCCCTCAGACTACATCAAACCAATTAGCTATCTTGAGCTTCCAGATTCTGAAGCAGCTGATATTGTTGGTGGAATTCCAAATTTTAGTCATCCAAGCGATCATCTACCAATTGGTGCTGAATTTGAAATCAACAAGGACTAA 1179 0.4029 MLKALAAIPPSISSITSVARKMSTSPTPPIHPKFISVEAADIHSRTKSDGFRFSFVSYNILAQVYVKSAFFPHSPPLSLKWKHRSNSILEVLKNLGADFFCLQEVDEFDSFYKGKMQELGYSSIYMKRSGERKRDGCGLFYKHDRAELVLEEKIEYNDLVKSIQDGNSSNDDEHSNVQTTQPDKQKDDTTKSGPKSGAEDRGDPNDPRVRLKRDCVGILAAFKFKGPSHQFLIVANTHIYWDPEWADVKLAQAKYLLSRLAQFKTLVSDKYECIPEVIVAGDFNSQPGDMVYQYLVSGNPSSELTTDYVEERPIPLTSVYASTRGEPPFTNYTPGFTGTLDYILFFPSDYIKPISYLELPDSEAADIVGGIPNFSHPSDHLPIGAEFEINKD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01587 392 Pfam Endonuclease/Exonuclease/phosphatase family 56 380 IPR005135 GO:0003824
Trre9g01587 392 SUPERFAMILY DNase I-like 52 389 IPR036691 -
Trre9g01587 392 Gene3D Endonuclease/exonuclease/phosphatase 20 392 IPR036691 -
Trre9g01587 392 MobiDBLite consensus disorder prediction 165 209 - -
Trre9g01587 392 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 28 389 - -
Trre9g01587 392 MobiDBLite consensus disorder prediction 177 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01587 Trre-Chr9 13870590 13874503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01587 K12603 - tpra:123907543 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01587 9 13870590 13874503 Trre9g01587 9 13870590 13874503 ECH