Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01520 ATGCCTTCCCCCCATAATATTAACCAAGAACATCATGAGGCTATTCATCATGATCATCCTCAATCTCATCCTCAGTTTCAATCTCAATCTAATCCTCAATCTCATCATAGAACACCCAAAAAAAGACTAGTAACTCATCAAAATGGTAACACACATTTCTTAATTTGGCTAGCAGCAATTCTATGCACAATATTAGCCATAGGAGTTGTAATTGGAGGAGTTGTAGTCTTTGTTGGTTACATAGTAATTCATCCAAGAGTACCTACAATAAGTATATCATATGCTCATTTAGATCTTTTCAGAAATGATTATGCTGGCCTTCTACAAACACAATTAAGTATATTTGTGAAGGCACAAAATGGGAATTTTAAGGCACATGCAACATTTTCAAATATTAAATTCAAAATTAGCTATCAAGGACAAGGTATAGCATATATGGTTGCTGACCCTTTTGATGTTCCTAAGAATAATTCCAAGGTTTTAGATTATGTTGTTCAATCTAATTCTATACCTTTAACTCCTGATCAAATGGTAGTAGTTGATGAATCATGGAAGAGAAATATTGTTGGGTTTGATTTGAAAGGTGATGCTAGGACTCAATGGAGAATTGGACCTTTTGGTTCTTTTAAATTTGGTTGTAAACTTGAGTGTACACTTAGATTTCATCCTTTGAATGGTAGTTATATTCCTTCAAGATGCACTTCTCAATCCAAATGA 717 0.3361 MPSPHNINQEHHEAIHHDHPQSHPQFQSQSNPQSHHRTPKKRLVTHQNGNTHFLIWLAAILCTILAIGVVIGGVVVFVGYIVIHPRVPTISISYAHLDLFRNDYAGLLQTQLSIFVKAQNGNFKAHATFSNIKFKISYQGQGIAYMVADPFDVPKNNSKVLDYVVQSNSIPLTPDQMVVVDESWKRNIVGFDLKGDARTQWRIGPFGSFKFGCKLECTLRFHPLNGSYIPSRCTSQSK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01520 238 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 234 - -
Trre9g01520 238 MobiDBLite consensus disorder prediction 1 41 - -
Trre9g01520 238 Pfam Late embryogenesis abundant protein 116 217 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01520 Trre-Chr9 13189660 13190376 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01520 - - psat:127121498 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01520 9 13189660 13190376 Trre9g01520 9 13189660 13190376 ECH
Trre9g01520 9 13189660 13190376 Trre15g02441 15 20287911 20288522 PCT