Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01467 ATGGAAGAGACAATAATTCCAGTGATTGATTTTGAAAAAATTTCAGAGGAATTGGAGTGCAAGAAACTAAGAGAAGCATGTGAAAAATGGGGTTGTTTCAGAATCATTAACCATACTATTCCTTTGAATCTTATGGCTGAGATGAAGATAGTTGTTGAAGCTCTTCTTGACCTTCCTATGGAGATAAAGAAAAACAACAAAGATGTTATTGCTGGGAGTGGTTACATGGCACCAAGTGTTGTTAATCCTTTCTATGAAGCTTTAGGTCTTTATGATTTGGGTTCTTCACAATCTGTGCAACAATTTTGCTCTCAATTGAATGTCACACCCCATCAGAGGGAAATAATGGAGGCATATGGCAAAGCAATTCATGATTTGGCAGTAAAAATAGGAGAGAAAATGGCTGAATCACTAGGCATAGTGGATGCTGATTTTGAAGAATGGCCATGCCAATTTAGAATCAACAAATATAACTTCACACCAGAAGCTGTAGGATCTCTTGGAGTTCAATTGCACACAGATTCAGGGTTCTTAACAATTCTTCAAGATGATGAAAATGTTGGTGGTCTCGAAGTGATGGACAATTCTGGCTCATTTATTTCAGTCCCTCCATTTCATGGAACCCTCCTTGCCAATCTTGGAGATATTGCTCAAGTATGGAGCAATGGAAGGTTTTGCAATGTGAAGCATCGTGTACAATGCAACGAAGCTACTAAGCGGTTTTCAATTGCCACATTTATGTTAGGACCTCGAAAGGGAAATGTTGAGGCTCCAGCAGAGGCGGTGGACCATGATCACCCACGTCTATATCAACCTTTTATTTATGACGATTATAGAAAGCTCAGAGTTTCAAAGAAGATGTCCACAGGTGAAGCGCTTGAGCTATTACGCTTGGCCTAA 900 0.3956 MEETIIPVIDFEKISEELECKKLREACEKWGCFRIINHTIPLNLMAEMKIVVEALLDLPMEIKKNNKDVIAGSGYMAPSVVNPFYEALGLYDLGSSQSVQQFCSQLNVTPHQREIMEAYGKAIHDLAVKIGEKMAESLGIVDADFEEWPCQFRINKYNFTPEAVGSLGVQLHTDSGFLTILQDDENVGGLEVMDNSGSFISVPPFHGTLLANLGDIAQVWSNGRFCNVKHRVQCNEATKRFSIATFMLGPRKGNVEAPAEAVDHDHPRLYQPFIYDDYRKLRVSKKMSTGEALELLRLA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01467 299 Pfam 2OG-Fe(II) oxygenase superfamily 151 247 IPR044861 -
Trre9g01467 299 FunFam 2-oxoglutarate-dependent dioxygenase DAO 4 295 - -
Trre9g01467 299 Pfam non-haem dioxygenase in morphine synthesis N-terminal 6 77 IPR026992 -
Trre9g01467 299 SUPERFAMILY Clavaminate synthase-like 6 294 - -
Trre9g01467 299 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 146 250 IPR005123 -
Trre9g01467 299 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 282 - -
Trre9g01467 299 Gene3D - 5 295 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01467 Trre-Chr9 12556576 12559320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01467 6 298 Glycosyltransferase AT5G59530 27.445 6.70e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01467 K23947 - gmx:100783059 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01467 9 12556576 12559320 Trre9g01467 9 12556576 12559320 ECH