Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01458 ATGGGATTTCTAGAGCTATTTTCTGTTGCTTCTTTTCCTGTCATCAAAATATTAATAGTCACTGCAATTGGCTTACTTCTTGCACTTGATAACATTAATTTGCTGGGAAAAGATGCAAGGAATCAAACCAATCATCTTGTACATTATGTGTTTAATCCTGCTCTGATTGGTGGTAATTTAGCCGAAACGGTCACATCTGAGAATGTTGTTTTATTGTGGTTCATGCCAGTGAACATATTGGTTACATTTTTGTTAGGCTCAGTCTTAGGATGGATCCTTATCAAACTCACAAGGCCTCCCAAAACAATTGAAGGTCTCATAGTAGGTGTTTGTTCTGCAGGAAATTTAGGAAACTTGCCTATAATCATTATCCCAGCAATATGTAAAGACAAAGGTAGTCCTTTTGGAGACCCTGATGTCTGCTATCAATATGGAATGGCTTATGCTTCACTTTCTATGGCAATTGGAGCTATCTTTATATGGACTTATGTGTACAACATAATGCGGATTTCATCAAGTAAAGTTCAAAAAGAAGGTAACAAAAGTAGTGAATCCATTACATTAGAGGCTTCAAGGGATGTATCAGAATCATTCATTGAGGAGGAATCAGAAGCTATAAATGCAGTAAAAGGCAATGTGGATGATTCATACATCCTATTGATTTCTAAGAGTGAGTCTGAGCAGAAAATGAAGGGACATATCTTAGATAAAATGAAGCATCAATGTGGAATGATTTTAAGCAACCCCAATTTCAGAGGCATATTTTCGCCGGCAACTCTTGGAGCGATTGTTGGATTTATTGTTGGTGTAGTTCCTAAGTTACGTAGTTTAATGATTGGAAGCAATGCTCCTCTTCATGTGATTGAAGACTCTACTTCCATGTTGGGTGAAGCTGCCATTCCAACAATAACCCTTATAATGGGTGCCAACCTTCTTAAAGGATTGAAGGGAGCAAGCACTCCATTTTGGACAATTATAGGAATCATAGCAGTCAGATATATTTTGCTACCAATGTTTGGTATTCTAATTGTTAAAGGGGCAACACAATTGGGTTTGGTGCAAGTAGATCCTTTATATCAGTTTATACTTCTCCTTCAATATGCACTTCCTCCAGCTATGGGTATAGGTACCATAGCCCAATTATTTGGAGCTGGTGAAAGTGAATGTTCTATTATCATGCTGTGGACTTATGCATTGGCGTCAATTGCGGTTACTCTTTGGTCAACCTACTTCATGTGGCTTGTGGCTTGTGGCTTGTGGCTTGATTATAGTATTCATTATTTATTTATTTACTAA 1296 0.375 MGFLELFSVASFPVIKILIVTAIGLLLALDNINLLGKDARNQTNHLVHYVFNPALIGGNLAETVTSENVVLLWFMPVNILVTFLLGSVLGWILIKLTRPPKTIEGLIVGVCSAGNLGNLPIIIIPAICKDKGSPFGDPDVCYQYGMAYASLSMAIGAIFIWTYVYNIMRISSSKVQKEGNKSSESITLEASRDVSESFIEEESEAINAVKGNVDDSYILLISKSESEQKMKGHILDKMKHQCGMILSNPNFRGIFSPATLGAIVGFIVGVVPKLRSLMIGSNAPLHVIEDSTSMLGEAAIPTITLIMGANLLKGLKGASTPFWTIIGIIAVRYILLPMFGILIVKGATQLGLVQVDPLYQFILLLQYALPPAMGIGTIAQLFGAGESECSIIMLWTYALASIAVTLWSTYFMWLVACGLWLDYSIHYLFIY 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01458 431 PANTHER - 1 415 IPR045033 GO:0080162
Trre9g01458 431 Pfam Membrane transport protein 12 407 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01458 Trre-Chr9 12440299 12443530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01458 K24139 - gmx:100785182 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01458 9 12440299 12443530 Trre9g01458 9 12440299 12443530 ECH
Trre9g01458 9 12440299 12443530 Trre15g02469 15 20585909 20589372 PCT