Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01444 ATGGCCATTACCCTTACAAAAGATTGGAAACCTATATGCGACATAAAGTGCCATAACCCACCGACTGAAGTGTCACAAGAATTGAACATAGATTCAATTGTTTCGAAGAGAAAGTTAACCAATCTTTCTGCATTGCCCCAGTTTTCAGTAGCTCCTGCTCCAAACTGTTCACGTGATAGGAATGAGTGGGGAAAGTTTTTGACTCACTTGCGCAAATATGACATGGTTGCTATTACAAGCTTTGAGCAGTACAAGTTTTACTTTTTGCCTCCTAAAGCATCAGGCGATTTAAGCTCAGTTAATGTTGCATATCAAACAGGCAGCACATGTACTGTAGATGCTCGTCCAAGAGATTGTGAATCAGGTTCCCACATAGCTGAGGAACATGGAGGACGCGATGCTGTTACAGGAAGAGGTCCCCCAAATTGTGGAGATGTCTCTTCACATCCTAAGTTTCCTCCCAGGGAGGATCGTGCATCTCGTTTTACATCCGAAACTTGTGGCGGAATTCAGTCACATGTGATGCAGGAAAGACTGCCTGAGAAAAATTTCATACGAGCAGACCCAAGTTACCTGAAAACTCTTGGTCAGGCTCACTCTGGATGGATATTTGGTGGAATAGCTGAGCTTGTTGATAATTCAAGAGATGCCAAAGCAACAAAGATCGATGTTTTTGTTGATATGATAAAGATGAAGAAATCTGAGAAGGATGTACCCATGCTGTCAGTAATTGATGATGGTCAAGGGATGAACCATGATGAGGTTGTGAAGATGGTATCTTTTGGGCACAAACAATCTGATTATGATGACAAGGATCAAATTGGTAGATTTGGTGTTGGATTCAAGACAGGAGCAATGAGGCTTGGCAGAGACGTTCTTGTTCTAACCCAGACTGCTAATTCTAGATCCATAGCTTTTCTTTCACAATCACTAAATGAAGGCAAGGATAATATAGAGATACCCATAGTTAGTTACTGCCGACAAGGACAACAAATGGAAGTTGACACAAAAGCTCAGTCTGAAACTTTGGCCAAGTACAATTTGAAAGCTATTAAGGAGTTCTCACCATTTAATAAATATCTTATTGGTGAAAAGGCAGCCTTGTTTTGTGGTGGTACGGGAACCCAAATATATATATGGAACTTGGACGAATGGGGCTCAGAGTGTTGCCTAGAGTGGCATGACGGACTGAAAGGTGGGAGTTCTTTTCACCAAGGTGACATTTTCATCCGAAGCAAAAGGAGTCGTTCGCGTCTAGGCCAACTTAATCAAAAGGTTCCTTTGGATTACTCATTACGAGCTTATTTGGAGGTCATCTTCTTAGTTCCACGAATGAAGATATGTGTTCAAGGGAAACTGGTTAAAAGTCGACCGCTAAGAAATTTCCTCACTAATACTGTTATCGTAACTGGTGACATCTTGGGAAGGGCAGTTGAATTGACTCTAGGATTTAGTCAATTAGAATGGGATCAAGCAAGCTGTGGAGTATTTTTGTATTGGCATGGTCGCTTAATTGAGGCTTACAAGAGAGTTGGTGGTATGATTCATAGTGCAGATGTGGGTCGGGGTGTAATTGGTGTCATGGATGTGACCAATTTAATGGATGATCAGAATGGTCGTGTGTGGGTGCATAATAACAAGCAAGGATTCCAAGACTGTGAAGCATATGCATGTCTTGAGCAGTGGCTTGGGAAAAAAGCAGATGAATACTGGGACAATAATTTTGATTCACTTAATTTGGACACCGATAACTGTGTCTACAAACCAGATTGTGACTGGGTGCAATGTGACAAATGCAGAAAGTGGAGAATGTTACCTCCCACCTTTGACAGCCGAGAATTGCCTGGACAATGGTTCTGTTATATGGAGCCTTACAAAGGTCAATGTGCAGATGCTGAACAGAAGATGAAGCCTGGCGTAGTCGCAATTTCCACACAGCGATCAGGATATGATCACACGCTGAAGGATTCTGACAGTATCAAGATTGAATCTGGTACGGATGCTTCTCGCACAGATAACAAATTCGTGAATTCTGAGGAGGTAAAATCAGCCTTGAAGCGGTTGAAAAGGGGACTTCCAAATCCCAAATCTCCTTCCTTAACCAAAGTTACCAAAATGAAAAAGAGATAA 2130 0.4188 MAITLTKDWKPICDIKCHNPPTEVSQELNIDSIVSKRKLTNLSALPQFSVAPAPNCSRDRNEWGKFLTHLRKYDMVAITSFEQYKFYFLPPKASGDLSSVNVAYQTGSTCTVDARPRDCESGSHIAEEHGGRDAVTGRGPPNCGDVSSHPKFPPREDRASRFTSETCGGIQSHVMQERLPEKNFIRADPSYLKTLGQAHSGWIFGGIAELVDNSRDAKATKIDVFVDMIKMKKSEKDVPMLSVIDDGQGMNHDEVVKMVSFGHKQSDYDDKDQIGRFGVGFKTGAMRLGRDVLVLTQTANSRSIAFLSQSLNEGKDNIEIPIVSYCRQGQQMEVDTKAQSETLAKYNLKAIKEFSPFNKYLIGEKAALFCGGTGTQIYIWNLDEWGSECCLEWHDGLKGGSSFHQGDIFIRSKRSRSRLGQLNQKVPLDYSLRAYLEVIFLVPRMKICVQGKLVKSRPLRNFLTNTVIVTGDILGRAVELTLGFSQLEWDQASCGVFLYWHGRLIEAYKRVGGMIHSADVGRGVIGVMDVTNLMDDQNGRVWVHNNKQGFQDCEAYACLEQWLGKKADEYWDNNFDSLNLDTDNCVYKPDCDWVQCDKCRKWRMLPPTFDSRELPGQWFCYMEPYKGQCADAEQKMKPGVVAISTQRSGYDHTLKDSDSIKIESGTDASRTDNKFVNSEEVKSALKRLKRGLPNPKSPSLTKVTKMKKR 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01444 709 Pfam Morc6 ribosomal protein S5 domain 2-like 430 571 IPR041006 -
Trre9g01444 709 MobiDBLite consensus disorder prediction 126 162 - -
Trre9g01444 709 MobiDBLite consensus disorder prediction 686 709 - -
Trre9g01444 709 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 177 683 IPR045261 GO:0016887
Trre9g01444 709 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 195 362 IPR036890 -
Trre9g01444 709 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 207 327 - -
Trre9g01444 709 Gene3D - 581 637 - -
Trre9g01444 709 ProSiteProfiles Zinc finger CW-type profile. 587 637 IPR011124 GO:0008270
Trre9g01444 709 Gene3D - 179 364 IPR036890 -
Trre9g01444 709 Pfam CW-type Zinc Finger 593 634 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01444 Trre-Chr9 12345010 12354674 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01444 - - cam:101494973 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01444 9 12345010 12354674 Trre9g01444 9 12345010 12354674 ECH