Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01384 ATGATGGAGAGAGCAGATTCTGTGCAGAAGCTGTACACGCGTATGCGACTATGGGAATTTCCGGATCAGTATGTGATTGAGCCAACAGATGGCTCTTCTGGTTCTTCTTTGGCTGTTAGTCGAGTTGATGGCTCCATGAAACTCATCGATGAGGTTCCAGAATGCAGCAACCTGCGAGTTCCTAAGATTTATACAATTTTCGGTGTTGTTGGGATATTGAGGCTTTTGGCTGGATCATATTTGATGGTCATAACTGAGCGTGAATGTGCCGGATCTTATTTGGGGCATCCGATTTTCAAAATTTTATCCATGAAGGTTTTTCCGTGTGATCATTCACTTAAAAGTACCCCTGCCGAACAGAAAAAGGCAGAGATGGAATTTTCTGCGCTGCTAAATGTTGCTGAGAAAACTTCTGGTCTGTTCTTCTCATATGAAACTAATTTAACTCTGAGTGCTCAGCGGTTGAATGACCTGGGTGATGAGTCTAGATTACTTCCTCTCTGGAGACAGGCAGAGCCGCGATTTCTATGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTTGACCCATACCTACTCCCTATAGTCCAAGGCAGTTTTCATTACTTTCAAGCAGCTATTGGGAAAGATATTATTGACGTCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCGGATGGATATGTTGCCAATTTTGTGGAAACAGAACAACTTATGCAGTTCAATGGGTATACCGCTTCATTTGTTCAGATTCGTGGTTCCATTCCTCTGCTCTGGCAGCAAATTGTGGACTTAACTTATAAACCGAAGTTTGAATTATTGAAACTCGAGGAAGCTCCACGAGTCCTCGAGAGGCATATATTAGATTTAAGAAAAAAATATGGAGCAGTGTTGGCTGTTGATCTTGTTAACAAGCATGGAGGAGAAGGGCGGCTATGTGAAAAATTTGGCAGTACAATGCAGCATGTGGCTAGTGATGATGTAAGATATGTTCACTTTGATTTCCATCATGTCTGTGGACACGTTCATTTTGAACGTCTATCAATTCTTTATGAACAAATATCAGACTTTCTTGAGAGAAACGGATATCTTCTGTTGAATGAAAAGGGCGAGAAAATGAAGGAGCAACTTGGAGTTGTTAGGACCAACTGTATTGATTGTCTAGACCGTACAAATGTAACTCAGAGCATGATAGGCCGGAATATGTTAGAATACCAGCTTAGAAGGCTTGGTGTCTTTGGGGCTGAAGAGACTATTAGTTCGCATCCAAACCTTGATGAACGATATAAGATCTTGTGGGCTAATCACGGAGATGATATAAGTATTCAATATTCAGGAACTCCTGCTCTGAAAGGAGACTTTACCAGGTTTGGGCACCGCACCATTCAAGGGATAGTAAATGATGGTTTTAATGCTCTCCAAAGATACTATTTGAATAATTTTTGTGATGGAACAAAGCAGGATGCAATTGATCTTCTGCAAGGACATTATATAGTTTCTGTCGGCCGAGATTCAGCTCCCTCTTCTCAGAAAGGAGGCATCGAAGCTATAGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGATTGGATTTCTTTTTGCAACCATGTCCTTGAGACAAGTTCGATATGATTTTCGACACTTCTTCTTTTCACTAATGTGGGCTGGCATTAGTGTCGGCATAGCAGCATTTGTGAGGGCCAACGGCCGGGTTTTCTGCAACAGACCCCGCCTACACAATCCGTTGCGTTAA 1791 0.4199 MMERADSVQKLYTRMRLWEFPDQYVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECSNLRVPKIYTIFGVVGILRLLAGSYLMVITERECAGSYLGHPIFKILSMKVFPCDHSLKSTPAEQKKAEMEFSALLNVAEKTSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLDPYLLPIVQGSFHYFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQLMQFNGYTASFVQIRGSIPLLWQQIVDLTYKPKFELLKLEEAPRVLERHILDLRKKYGAVLAVDLVNKHGGEGRLCEKFGSTMQHVASDDVRYVHFDFHHVCGHVHFERLSILYEQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDERYKILWANHGDDISIQYSGTPALKGDFTRFGHRTIQGIVNDGFNALQRYYLNNFCDGTKQDAIDLLQGHYIVSVGRDSAPSSQKGGIEAIASFPLALGLVLIGFLFATMSLRQVRYDFRHFFFSLMWAGISVGIAAFVRANGRVFCNRPRLHNPLR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01384 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 593 - -
Trre9g01384 596 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Trre9g01384 596 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01384 Trre-Chr9 11801117 11812279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01384 2 594 Acyl Lipid Metabolism Gene Families AT3G51460 74.790 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01384 K21797 - gmx:100796999 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01384 9 11801117 11812279 Trre9g01384 9 11801117 11812279 ECH