Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01355 ATGGTTTCCGAGCAATGCTTACCCATCACTTCCACCCAGCTTCTCGAAAAAGTTTTCCCTGTTTATGCTTTGGGTCTATTTGACCCGAATCCAGATTACATCCTAGACGGGTCTGACCCGATTTGGGAAGCTATCAAAGCTGAAGCTAAGCTTGAGGCAGAGAAGGAACCAATTTTGAGCAGCTTTTTGTATGCGAGTGTCTTGGCTCATGAATGTTTGGAACAAGTGCTGGCTTTTGTTGTTGCTAACCGTCTTCAAAGTCCTACTCTTTTGGCTACACAGTTGGTGGATATCATGTGCAATGTTGTCATGCATGACAAAGCTATTCAGCGATCGGTCCGCCTTGATCTTCAGGCGTTTAAGGATCGGGACCCTGCATGTTTGTCCTATTGCTCAGCAATTTTGTACATGAAGGGATTCCATGCTCTGCAGGTTTACCGGGTCGCACATGCATTGTGGCACCAGGGACGCCAAATCCTTGCTTTGGCTTTGCAAAGCCGTGTTAGCGAGGTTTTTGGAATTGACATTCATCCTGGTGCGAAAATTGGGGAGGGAATTTTGCTAGATCACGGGACAGGCATGGTTATTGGTGAAACTGCTGTTATTGGAAACAGAGTTTCAATGATGCAAGGTGTAACATTAGGAGGCACCGGGAAAGAAATAGGTGATCGCCATCCCAAAATAGGCGAAGGTGTACTGATTGGAGCTGGTTCAACTATACTCGGAAATATCAAAATTGGTGAAGGTGTGATGATTGCTGCTGGCTCCCTTGTGTTAAAGGATGCCCCTTCTCGCAGCATCGTGGCAGGAACACCGGCAATAGTTCTCGGAAGTCTACGGGACCTAGACCCATCTCTAACAATGAAACATGATGCTACAAAACCATTTTTCGCTCAAGTTGCTGCTAGCTTTAGCGATGAAAAGTCCGGTGGAGCTGAGAATCCAGAAAAAAATGAAGCAAACAACACCCTTGAGAGGTTCCGTTGCCTAAATCTCATTTCGGATTGA 1008 0.4603 MVSEQCLPITSTQLLEKVFPVYALGLFDPNPDYILDGSDPIWEAIKAEAKLEAEKEPILSSFLYASVLAHECLEQVLAFVVANRLQSPTLLATQLVDIMCNVVMHDKAIQRSVRLDLQAFKDRDPACLSYCSAILYMKGFHALQVYRVAHALWHQGRQILALALQSRVSEVFGIDIHPGAKIGEGILLDHGTGMVIGETAVIGNRVSMMQGVTLGGTGKEIGDRHPKIGEGVLIGAGSTILGNIKIGEGVMIAAGSLVLKDAPSRSIVAGTPAIVLGSLRDLDPSLTMKHDATKPFFAQVAASFSDEKSGGAENPEKNEANNTLERFRCLNLISD 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01355 335 CDD LbH_SAT 172 272 IPR045304 -
Trre9g01355 335 Pfam Serine acetyltransferase, N-terminal 41 144 IPR010493 GO:0005737|GO:0006535|GO:0009001
Trre9g01355 335 Pfam Bacterial transferase hexapeptide (six repeats) 225 258 IPR001451 -
Trre9g01355 335 PANTHER SERINE ACETYLTRANSFERASE 36 300 - -
Trre9g01355 335 FunFam Serine acetyltransferase 4 28 174 - -
Trre9g01355 335 SMART SATase_N_2_a 41 145 IPR010493 GO:0005737|GO:0006535|GO:0009001
Trre9g01355 335 SUPERFAMILY Trimeric LpxA-like enzymes 36 288 IPR011004 -
Trre9g01355 335 FunFam Serine acetyltransferase 175 296 - -
Trre9g01355 335 Gene3D Hexapeptide repeat proteins 175 295 - -
Trre9g01355 335 NCBIfam serine O-acetyltransferase 114 273 IPR005881 GO:0005737|GO:0006535|GO:0009001
Trre9g01355 335 Gene3D serine acetyltransferase, domain 1 32 174 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01355 Trre-Chr9 11557291 11561065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01355 15 323 Miscellaneous Gene Families AT2G17640 68.868 3.05e-146 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01355 K00640 - gmx:100775449 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01355 9 11557291 11561065 Trre9g01355 9 11557291 11561065 ECH