Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01256 ATGGGTTGTTGTTATTCAAGAGTAGAGAGGGAAGAAACGGTGTCGCATTGTAAATCAAGAAAACGTTACATGAAACAGTTGGTTGAAGCAAGACATGCTTTTTCAGCTGCACATGTTATGTACATTCGATCTCTTCGTTCAACTGGTTCTGCTTTGTTTCACTTTGCAAACGCTGAAAAAACCACTCATTTAAACCACCATCTTATTCCTGAGCCACAACCCATTCTTCCACCACCGCCGCCGCGTGCTCCGTCGCCAATGCCACCGCCTCCACCACCACCGATGAGTCCGAGTTTAAGTTCTTATACTTGGACTTCTGGGACAGGTTCATCTCCTCTTCCGCCGCCGCCTCCGCCGCCACCTCCGCCGCCGGTGATTTCCTCCGGTTGGGATTTCTGGGATCCTTTCATGCAACAACCACCTCCTCCTCCTTCGTCGAGGTCGGCGACGGAGGAAGAGTGGGAAGCTACTACTACTACTGGCTCTGAGGTGGTTGTGATGGCTGGTGGTGCGGCGGCGAGTATGGCTACTCCGGCTTCTGGGGTGGTGGGGTTTTCTAAGGAAACATCAAGTGAACTTGCAATGGTGGTTTCTAGAAATAGTAAAGATCTGGTTGAAGTTATCAAAGAACTTGATGATTACTTTCTTAAAGCTGCTGATGCTGGTTCTCATGTTTCATTTCTGTTACAAGTTCCAACTTCTGGTTTTTCTGATCATAGTAAAGCAAGTAAAATGTACGGAAATGGATGGAGTTTGAGTCCATCAATGTGGGCTTGGGGTTCTTCAAGTCCTAAACTGAATGGATTTGGGAAACTGACTCAAGAGGTTTCTGTTGGTAGTTTTAGGGCTAATGGTATTGGAAATGGTGGACATTGTTCTACCTTGGAGAGACTTTATGCATGGGAGAAGAAATTGTACCAAGAAGCCAGGAATGCGAAAACAATAAAGATGGAGCATGAGAAGAAAGTGGCAATGGTAAGGAAATTGGAGATGAGAAGTGCTGATTATTTGAAGACAGAAAAGGCAAAGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTTCTTCCCAAGCCATAGATAGTACATCGGCTGAAATCATCAAATTAAGGGAGATAGAACTCTATCCTCAACTCATTGAGCTTGTCAAAGGGTTGATGTGCATGTGGAGAAGCATGTATGAATGTCATCAAGTCCAGAAACACATAGTTCAACAACTCGAATACCTCAATACCATACCATCAAACAACCCTACGTCTGAAATTCATAGACAATCGACTCTTCAGCTAGAGCTTGAAGTACAGCAATGGCACCAATCCTTTTGCAACCTATTCAAAGCTCACCGTGACTATATTGAATCCCTCACAGGTTGGTTAAGGCTCAGCCTTTACCAGTTTAGCCGAAACCCTCTTAGCAGAACCGCTGAAGAGTCTAAGATGTACACCCTCTGCGAACAATGGCACCTTGCTGTTGAGCATATACCTGACAAGGTAGCGTCCGAAGGAATAAAAAGTTTGTTGACGGTTATTCATGCGATTGTAGTTCAACAGATGGAGGAGCATAAACAAAAGAAGAAGTCGGATTATGCGTTCAAAGAGTTTGAGAAGAAGGTGGTTCAGCTTAGATCCTTGGAGTGCAAGTATGGTCCGTACTCCATGTCCGAAAGATCTGGTTCGATGAGAAGAATGAAGGACCCTGTCGTGGAGAAGCGAGCTAAGGTGGAAGCTTTGAGAGCGAAGGCTGAAGAAGAGAAGACGAAACATGAAAAGGCAGTGAGTGTTACGAGGGCAATGACACTAAATAACTTGCAAATGGGTTGTCCTCAAGTTTTTCAAGGGATTGTAGGGTTTTCAAGTGTGTGCACAGAGGCTTTTGAATCTGTTTACAACAAAGCTAAAGTTGCTGAACAGGAGCGCGACGTGAAGAGAATATTACCGTAG 1941 0.4456 MGCCYSRVEREETVSHCKSRKRYMKQLVEARHAFSAAHVMYIRSLRSTGSALFHFANAEKTTHLNHHLIPEPQPILPPPPPRAPSPMPPPPPPPMSPSLSSYTWTSGTGSSPLPPPPPPPPPPPVISSGWDFWDPFMQQPPPPPSSRSATEEEWEATTTTGSEVVVMAGGAAASMATPASGVVGFSKETSSELAMVVSRNSKDLVEVIKELDDYFLKAADAGSHVSFLLQVPTSGFSDHSKASKMYGNGWSLSPSMWAWGSSSPKLNGFGKLTQEVSVGSFRANGIGNGGHCSTLERLYAWEKKLYQEARNAKTIKMEHEKKVAMVRKLEMRSADYLKTEKAKKEVEKLESQMMVSSQAIDSTSAEIIKLREIELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIESLTGWLRLSLYQFSRNPLSRTAEESKMYTLCEQWHLAVEHIPDKVASEGIKSLLTVIHAIVVQQMEEHKQKKKSDYAFKEFEKKVVQLRSLECKYGPYSMSERSGSMRRMKDPVVEKRAKVEALRAKAEEEKTKHEKAVSVTRAMTLNNLQMGCPQVFQGIVGFSSVCTEAFESVYNKAKVAEQERDVKRILP 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01256 646 MobiDBLite consensus disorder prediction 110 128 - -
Trre9g01256 646 Pfam Protein of unknown function (DUF632) 204 511 IPR006867 -
Trre9g01256 646 SUPERFAMILY Formin homology 2 domain (FH2 domain) 114 124 - -
Trre9g01256 646 PANTHER UNCHARACTERIZED 1 633 - -
Trre9g01256 646 MobiDBLite consensus disorder prediction 68 159 - -
Trre9g01256 646 Coils Coil 567 591 - -
Trre9g01256 646 Coils Coil 339 359 - -
Trre9g01256 646 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Trre9g01256 646 MobiDBLite consensus disorder prediction 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01256 Trre-Chr9 10631405 10635523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01256 1 59 Acyl Lipid Metabolism Gene Families AT2G27090 38.983 5.13e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01256 - - aprc:113869576 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01256 9 10631405 10635523 Trre9g01256 9 10631405 10635523 ECH