Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01192 ATGGACCGTCGAGGTTGGCCGTGGAAGAAAAAATCATCCGATAAAATCACAAAGGCGGATATACCATTTGTTACACCTGACTCTGTTGGTTCCACCTTATCTTCTGTGGCACATTTAGGAAATCAGCAGGAAAACTGCACAAATAAGAACTATGTTCAAATTTCAATGGAGTCATACGCGCGTATGTCTGGATTGGAAGATCAAGTTGTGAACCTGGAGGATCAAGTAAAAGATTTGGAATCAAAGCTATCAGCAGCTTATTCAGAGTTAGATAACAAGGAAAATCTGGTTAAACAACACGCAAAAGTTGCCGAGGAAGCAGTCTCAGGTTGGGAGAAAGCTGATGCTGAAGTTGTTTCCTTAAGATGTCAACTTGAATCGATCACCCTGTCAAAGCTTAGTGTTGATGAGAGAGCAACTCACTTAGATGGAGCTCTGAAAGAATGCATGAAGCAGATAAGAACTGTAAAGGAGGAAAGTGAGCAGAAAATACAGGAAGTGATTCTAATGAAATCTCAACAGTGGGAGAAATTCAAGTTAGAGCTTGAAGCAGAAATAGACAAATTGGATAAAGGACTTCGTGAAGAAGCTCGTGAAAATGCTGCACTTCTGAGATCATTACATGAAAGTTCGAATAAAATAGTGAAACTAAAAGAAGAAAAGTCTGAAGTTGAGTCTGAGTTAGAGCTTCAAAAGAAGAATGTTCAGCAATATGAAAAAGAAATAAATTCATTGAAGTATGAGCTACATATGATTTCTAAGGAGATGGATATCCGCAATGAAGAGAAGGACATGATTCTGAAATCAGCAGAAGTGGCAGACAAACAACGCGCTGAGGATGTTAGGATCATTGCCAATCTAGAGGGCGAGTGCCAACGGCTTCGCGGTCTTTTGCGAAAGAAGTTACCTGGACCTGCTGCATTGGCACAAATGAAGCTAGAAGTTGAAAGTACACGCCACGTCATTAGTGGAATCCATCAAAGAAAAACTAGTAGCTTCCAAGAATCCGAGTTTCTTAATATGTCGAAACAATTGGAGTTGTTTGAAGAAGAAACGAAGAGATTGAAAGAAGCTTTGGCCTCAAGTAAAGCTGAACTGCAGGCTTCTAGGAACTTGAACACGACAACAGTTGGCAGACTTAAGAGCTTAGAAGCCGAGGTACAAGTTCTTTATCAAGAAAGAAGTTCGCAGAAATCAAACTTGGCGATCAATTACCAAAATTTTTCAAGTAGAATTTGTAGCAATTCACCAAGCATCACTTCTATATCTGATGGTTGGCATGAGGATCCGGAAAGTCCTGTTGAGTCATCTGCAGACTCAATTTCTGATCATTTTGATGTAAGGAGAGTTAGAAGCTCAGTTAAATTTGAGAGCCACAAAAGTGAAACTATCTCAGAACTGATGGACGATTTCCTCGAAGTTGAGAAAATGGCATCTTCATCGGACACTGACAGTGTACAGATTGTTGACAAAGTTAAGAACGACTCTGAAGATAAACAATTGAAATCAAATGATGCTTTGGTTGAGATTCAGCTGAAATGTATGACAGAGTCTTATAAGTCGCTTCAAACACATGTAGAGGAGTTAGAAGCTGAAAATAAGTTTCTTAAGGAAAAGATTGATGAGCTAAAGAATGATCTTGAGGAGGAAAAACAATGTCATCATGATATTTTGGTTAAATACAAAGAAATTGAAGAAAAAATGCCAAGGGACAAGTGCCTGCTGTGCGCATCGAATTCGGAAGCAAATAGTGACATCAATACTCGGAAGGATACGGAACTAGCAGCTGCAGAGAAAAAGCTAGCAGAATGTCAAGAGACTCTGCATGTACTTGGTAGGCAATTACAAGCAATGATCCCACAAATTGGCTCTAAAAGACTTCAAACAAACGAATCATCGGTTAAACCAAATTATGGCTGGTCAAATTCTAATGGCTCCTATAATAACTCAGACGAAATTGATCATGCTGAAGCATACAGTGTATCTTCGAATTCTGACATTCAAGGAGTGAATGATGAGTTTTCATCATCTCACAACTTTGGTTCCATGTCATGTCTTTCAGACGCCGAATGCAGCATTTCAACAAATTCCTCAACTGAGTCAAGCCAGAGTTGTTATATGCTTACCGAATCACATTCACATTCTTCCGGTTCTGCTATACAGGGAAGCAACATGCACATGGTTTGA 2187 0.3941 MDRRGWPWKKKSSDKITKADIPFVTPDSVGSTLSSVAHLGNQQENCTNKNYVQISMESYARMSGLEDQVVNLEDQVKDLESKLSAAYSELDNKENLVKQHAKVAEEAVSGWEKADAEVVSLRCQLESITLSKLSVDERATHLDGALKECMKQIRTVKEESEQKIQEVILMKSQQWEKFKLELEAEIDKLDKGLREEARENAALLRSLHESSNKIVKLKEEKSEVESELELQKKNVQQYEKEINSLKYELHMISKEMDIRNEEKDMILKSAEVADKQRAEDVRIIANLEGECQRLRGLLRKKLPGPAALAQMKLEVESTRHVISGIHQRKTSSFQESEFLNMSKQLELFEEETKRLKEALASSKAELQASRNLNTTTVGRLKSLEAEVQVLYQERSSQKSNLAINYQNFSSRICSNSPSITSISDGWHEDPESPVESSADSISDHFDVRRVRSSVKFESHKSETISELMDDFLEVEKMASSSDTDSVQIVDKVKNDSEDKQLKSNDALVEIQLKCMTESYKSLQTHVEELEAENKFLKEKIDELKNDLEEEKQCHHDILVKYKEIEEKMPRDKCLLCASNSEANSDINTRKDTELAAAEKKLAECQETLHVLGRQLQAMIPQIGSKRLQTNESSVKPNYGWSNSNGSYNNSDEIDHAEAYSVSSNSDIQGVNDEFSSSHNFGSMSCLSDAECSISTNSSTESSQSCYMLTESHSHSSGSAIQGSNMHMV 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01192 728 Pfam Filament-like plant protein, long coiled-coil 93 500 IPR008587 -
Trre9g01192 728 Pfam Filament-like plant protein, long coiled-coil 500 621 IPR008587 -
Trre9g01192 728 Coils Coil 587 614 - -
Trre9g01192 728 Coils Coil 345 365 - -
Trre9g01192 728 Coils Coil 62 96 - -
Trre9g01192 728 Coils Coil 179 255 - -
Trre9g01192 728 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 497 715 - -
Trre9g01192 728 Coils Coil 146 166 - -
Trre9g01192 728 Coils Coil 512 553 - -
Trre9g01192 728 Coils Coil 380 400 - -
Trre9g01192 728 SUPERFAMILY Tropomyosin 61 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01192 Trre-Chr9 9774187 9777824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01192 - - psat:127120157 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01192 9 9774187 9777824 Trre9g01192 9 9774187 9777824 ECH