Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01100 ATGAAGACTTCACGGTGGTCTATGGCGGTGACTCTAACGATATTGTCCATTTTACCCTTTTTGTTTCAGAACGGAAATGGACCGCTACAAGTAGTAGAAGCCTCAAATTCAGTTTCCGCTTTCGTTCAAAACGCAATCTATTCCAACAGAATCACCATCTTCTCCAAATCCTATTGTCCGTATTGTTTGCGTGCTAAACGTGTTTTTGTTGAACTAAATGAGCAACCTTTTGTTGTTGAGCTTGATTTGCGAGATGATGGATATGAAATTCAGAGTGTTCTTCTGGATTTGATAGGTAGAAGGACAGTTCCACAAGTATTTGTCTATGGCAAGCATATTGGAGGATCAGATGATCTCAGTGCTGCAGTCCAGAGTGGTGAATTGCAGAAGCTTCTGAAAACAAGTTGA 408 0.4069 MKTSRWSMAVTLTILSILPFLFQNGNGPLQVVEASNSVSAFVQNAIYSNRITIFSKSYCPYCLRAKRVFVELNEQPFVVELDLRDDGYEIQSVLLDLIGRRTVPQVFVYGKHIGGSDDLSAAVQSGELQKLLKTS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01100 135 ProSiteProfiles Glutaredoxin domain profile. 39 135 - -
Trre9g01100 135 Gene3D Glutaredoxin 32 135 - -
Trre9g01100 135 FunFam Glutaredoxin 2 33 135 - -
Trre9g01100 135 NCBIfam glutaredoxin 51 132 IPR011899 -
Trre9g01100 135 PANTHER GLUTAREDOXIN 2 32 133 - -
Trre9g01100 135 SUPERFAMILY Thioredoxin-like 40 133 IPR036249 -
Trre9g01100 135 ProSitePatterns Glutaredoxin active site. 53 68 IPR011767 -
Trre9g01100 135 Pfam Glutaredoxin 51 113 IPR002109 -
Trre9g01100 135 CDD GRX_GRXh_1_2_like 50 131 - -
Trre9g01100 135 PRINTS Glutaredoxin signature 96 109 IPR014025 -
Trre9g01100 135 PRINTS Glutaredoxin signature 110 123 IPR014025 -
Trre9g01100 135 PRINTS Glutaredoxin signature 51 69 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01100 Trre-Chr9 8827167 8829234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01100 42 133 Miscellaneous Gene Families AT4G15700 32.609 1.15e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01100 K03676 - gmx:100500348 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01100 9 8827167 8829234 Trre9g01100 9 8827167 8829234 ECH