Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01062 ATGGCTTCTATGGCTTCATTCTGTGGTGGTGTGACCTTTCAGAACCGTAGGAGACACAACAGTGGAATGATATTTGCAAGTTTGGGAAACAAAGAAGCAACTACTTTGGGAGTGAAAATTACGGAAGGTGAGGGCAATTTGCCTAAACTCGTTCTCACTTCTCCGGCTGGTAGTGAGGCTGAAATATACCTGTTTGGTGGTTGCATTACCTCTTGGAAAGTTCCCAATGGCAAAGACCTTCTTTTTGTTCGTCCTGATGCTGTTTTCAATAAGAAGAAACCAATAAGTGGAGGAATTCCGCATTGCTTTCCACAGTTTGGTCCTGGTGCAATTCAGCAGCATGGGTTTGCAAGGAATCTGGATTGGACTGTTGGTGATTCTGAGAATGTGGAGGGAAATCCCGTCGTAACTCTGGAACTGAAGGATGATTCTTATAGTCGCGCTATGTGGGATTTCGGCTTCCATGCTTTATACAAGGTCACGCTAAATGCTAAAAGTCTTTCGACCGAGTTAAAAGTTAAAAATACAGACAATAAACCATTCTCTTTCAATACTGCCTTGCACACATATTTTCGGGCTTCTGTAAGTGGTGCATCTGTTAAGGGATTAAAAGGTTGCAAAACTTTGAACAAACATCCAGATCCAAATAATCCAATTGAGGGTAGTGAAGAAAGGGATGTGGTCACATTTCCAGGATTTGTAGACTGCGTTTATCTTGACGCGTCAAGCGAGTTGCAACTTGATAATGGCTTGGGTGATATAATATCTATCAAGAACACAAACTGGTCAGATGCAGTGTTGTGGAATCCTCATCTTCAAATGGAAGCATGTTACAAAGATTTTGTTTGCGTTGAAAATGCTAAGATTGGAAGCGTCCAGCTAGAGCCAGAACAAACTTGGACGGCCGTGCAGCATCTTACCATTGCTTGA 930 0.4237 MASMASFCGGVTFQNRRRHNSGMIFASLGNKEATTLGVKITEGEGNLPKLVLTSPAGSEAEIYLFGGCITSWKVPNGKDLLFVRPDAVFNKKKPISGGIPHCFPQFGPGAIQQHGFARNLDWTVGDSENVEGNPVVTLELKDDSYSRAMWDFGFHALYKVTLNAKSLSTELKVKNTDNKPFSFNTALHTYFRASVSGASVKGLKGCKTLNKHPDPNNPIEGSEERDVVTFPGFVDCVYLDASSELQLDNGLGDIISIKNTNWSDAVLWNPHLQMEACYKDFVCVENAKIGSVQLEPEQTWTAVQHLTIA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01062 309 CDD D-hex-6-P-epi_like 49 307 IPR025532 -
Trre9g01062 309 Gene3D - 45 308 IPR014718 GO:0030246
Trre9g01062 309 Pfam Aldose 1-epimerase 49 306 IPR008183 GO:0005975|GO:0016853
Trre9g01062 309 PIRSF PHexose_mutarotase 31 309 IPR025532 -
Trre9g01062 309 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 43 308 - -
Trre9g01062 309 SUPERFAMILY Galactose mutarotase-like 49 306 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01062 Trre-Chr9 8478410 8481584 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01062 K01792 - gmx:100797902 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01062 9 8478410 8481584 Trre9g01062 9 8478410 8481584 ECH