Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01042 ATGGATTCAATGGAGTTCAAATTGAGTGAACTATTGAAAGAAGTTCAACTAGATTACTCTCCTCTGTTTTCTAAACTCGTAAACGACACCGTTTCCACCATCAAATCATCCATTGATAAAATCCCTAAAGACTTTAAGGTAACTTCTGATTTGGCACCAAATTTTGTTAGGGACATTGGTGCTGATAAAGTGGAGTTCAAATTTAAGAAGCCATTGGATTTTAAGATTGGTGGTAGTTACTCCATAAAAAGTCTTACTAGGCCTGAATTAAATGTGGACCTTATTATAAGGTTGCCAAAGGAGTGCTTCCATGAGAAGGATTATTTGAACTATAGGTACCATGGCAAGAGGTGTCTTTATCTCTGCTTGCTGAAAAAGTATTTGGAGAAATCTCCATCTATTGATAGGGTTGAATGGTCTACCCTACAGAATGAAGCTCGAAAGCCTTTACTGATTGTGTATCCGGCTGCAAAGCTTGTTGATGTTGATGGGTTTTTTGTGAGAATTATTCCATCTGCTACGTCTATCTTTAACATAGCAAAGTTAAACCTGACGCGTAATAACATTCATAATTCGAATAATGAAGGGAGTTCTGTTCAAGCTACACCGAAGTATAATTCTAGTATTTTGGAAGACATGTTTATAGAGGATACTGAATTAATCAACAATTTTTTTCTTGAATGGAAGGAACTAAGAGAGGCTTTAATCCTACTTAAGGTATGGACTCGACAAAGAAGTTCTATATATGCTCATGATTGCCTGAGTGGCTTTTTGCTATCTATCATATTGGCACATCTCGCTTCCAGGCAACAAATTAACAAGTCAATGAAGGCAATTGAAATATTTCGCATTACCTTAAACTTCATTGCTACATCAGAGACATGGAGCCGAGGTCTCTACTTTCCAAAGGAAGGCCAGGGAAATATTACTAAAGAGGAAAGGATGCAACTTAAAGGGTCATTTCCAGTTGTCATATGTCATCCATCGGGGGCTTTCAATTTGGCTTTTCGAATGTCTAGGATCGGTTTTACTCAGCTTCAAGATGAGGCTGCTTCAACACTTAAATGCATGGAAAAATGTAGAGGTGGTGGATTTGAGGAAGTTTTTATGAACAAGATTGACTATGCTGTTAAATATGACTATTGTATGAGAATAAACTTTAAGGGAAACAAGGAGCTATATGCATCAGGATTTTGTTCGGATGATGAATGCTGGAGATTGTATGAGGAGAAGATACATGCTATATTATCTAAAGGATTGAATGATAGAGCAAAATTCATTCGAGTTATATGGCGAAATGCAGAATGCCAGTGGAGCGTGAATGATGGCCTGTCAGTACTTGATAAAGAGCCCTTGTTCATAGGAATTTCAGTCAGTGATTTGGAGAAAGCATTTAGGATGGTTGATATTGGTCCAAATGCTGAAAGTAAAGAAGAGGCTCTTGAGTTTCGAAAGTTTTGGGGAGAAAAAGCAGAACTTAGAAGATTTAAAGATAGTAGAATTGCCGAAAGCACAGTATGGGAATGCCAAAAATGGGAAAGACATCTGATTTTGAAAAAAACAGCCGAGCACGTGCTCAGTCGGCATCTTTCTCTATCCAAGGAAAATATTGTAGTAATTGTGGATCAACTTGATTTCTCTTTGGCTCACGGTGCTGTAGATCCTATATCACACTCTGGAAATTTGTTGGAGGCATTTGATCTTCTATCAAAGCGTCTGCGTCTTATTGGAAACCTCCCTTTGAAGGTGTCGAGCGTACAACCTTTAGACTCTGCATTCAGGTTTACATCAGTCTTCCCTCCTGAACCTCATCTTCTAGCTAATGAAAAAATTGAATCTTTCAGACTGAATAAGTTGGTCCCATCATGCATTCAACCACTAGAAATTATGATTCAGTTGGAAGGCTCTGGGAATTGGCCAATGGATGAAATTGCAATTGAAAAAACAAAGTCTAGTTTCCTTATTCAAATTGGAGAAAGTCTTCAAAAGAAGTGGGGGATGACATGCACTGCAACCGAGGATGATGTGGATGTGTTAATGTCAGGATATGCATTTCGTCTTAAACTTTTGCATGAGATGGCCCTTAGTTTAATTGGGAGTGATCAAAAATCGCGGGTACATTCTGCAGACAAGAAACTTTTGATTCGTAGTCAACATGCTAGCATGATCAATGGACTGCAAAGTCGTTTCCCAATATACGGACCAGTAGTTAGACTAGCAAAACGTTGGGCTGCTTCACATCTATTTTCCGCTTGTTTGGTAGAGGAGGCCATTGAGTTAGTGGTTGCATATCTCTTTCTCAATCCTTTGCCATTTGATGCTCCCTGCTCGCGGATCACCGGATTTTTAAGGTTCCTGCAGTTGCTGTCAAACTACGATTGGACTTTTTCTCCCTTGGTTGTTGACATAAATAATGACTTGAGCCAAAGTGATGAAAAAGAAATAAATGATAACTTTTTGCTAAGAAGAAAAGGCCAGGGAGAGAATGTAGGGCCAGTGATGTTCTTGGCTACAGTTTATGATAAAGCATCTGAGGCTTGGACTGGATTATCACCTAGTGCACTGGAACTTAAAAGGTTAGTTGCATATGCTCGGAGCAGTGCAAATTTGCTGATGAAACTCACATTTCAGGAGGAGATTGGTCCATATAGATGGGAGTGCGTTTTACGAACTCCTTTAAACAATTACGATGCAATCATCATTCTTCACAAGGACAAACTCGCGTATCCTCAAAGGCTTCTTTTTTCATCAGAAGTTGTTCACGGAACCCAAGTTGCTAAAGGACATACTAGCAAGTTCTTCCAACCCTTTTTGTTGCCTAAAGATTTGAAAGGTAGGCCAGAGGAACTTAAAAATAAGTTGCTGGTAGACTTCAATCCATCAAGGTGCTTTATCAAAGATTTAGAGAAAGAGTTTTCTACCACATTCCAGTTATGGCATGATTCTCTAGGAGGTGATGCCATCGGCCTAACATGGAGGAAATCGCATCCTACCAAGAAGCGGAAGCAAGAGGAAGTGGTTGAGGAAGGATATGACCCTCGGAAGGTGCTAAAAGCCGTAGGTGAAGTTGGAAAAGGGTTTGTGAGGAGTATATACTTTCTCAGGCCACCAAGGATCGCAAATTAG 3126 0.3944 MDSMEFKLSELLKEVQLDYSPLFSKLVNDTVSTIKSSIDKIPKDFKVTSDLAPNFVRDIGADKVEFKFKKPLDFKIGGSYSIKSLTRPELNVDLIIRLPKECFHEKDYLNYRYHGKRCLYLCLLKKYLEKSPSIDRVEWSTLQNEARKPLLIVYPAAKLVDVDGFFVRIIPSATSIFNIAKLNLTRNNIHNSNNEGSSVQATPKYNSSILEDMFIEDTELINNFFLEWKELREALILLKVWTRQRSSIYAHDCLSGFLLSIILAHLASRQQINKSMKAIEIFRITLNFIATSETWSRGLYFPKEGQGNITKEERMQLKGSFPVVICHPSGAFNLAFRMSRIGFTQLQDEAASTLKCMEKCRGGGFEEVFMNKIDYAVKYDYCMRINFKGNKELYASGFCSDDECWRLYEEKIHAILSKGLNDRAKFIRVIWRNAECQWSVNDGLSVLDKEPLFIGISVSDLEKAFRMVDIGPNAESKEEALEFRKFWGEKAELRRFKDSRIAESTVWECQKWERHLILKKTAEHVLSRHLSLSKENIVVIVDQLDFSLAHGAVDPISHSGNLLEAFDLLSKRLRLIGNLPLKVSSVQPLDSAFRFTSVFPPEPHLLANEKIESFRLNKLVPSCIQPLEIMIQLEGSGNWPMDEIAIEKTKSSFLIQIGESLQKKWGMTCTATEDDVDVLMSGYAFRLKLLHEMALSLIGSDQKSRVHSADKKLLIRSQHASMINGLQSRFPIYGPVVRLAKRWAASHLFSACLVEEAIELVVAYLFLNPLPFDAPCSRITGFLRFLQLLSNYDWTFSPLVVDINNDLSQSDEKEINDNFLLRRKGQGENVGPVMFLATVYDKASEAWTGLSPSALELKRLVAYARSSANLLMKLTFQEEIGPYRWECVLRTPLNNYDAIIILHKDKLAYPQRLLFSSEVVHGTQVAKGHTSKFFQPFLLPKDLKGRPEELKNKLLVDFNPSRCFIKDLEKEFSTTFQLWHDSLGGDAIGLTWRKSHPTKKRKQEEVVEEGYDPRKVLKAVGEVGKGFVRSIYFLRPPRIAN 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01042 1041 Pfam Nrap protein domain 1 92 218 IPR035082 -
Trre9g01042 1041 Pfam Nrap protein PAP/OAS-like domain 231 372 IPR035367 -
Trre9g01042 1041 Pfam Nrap protein nucleotidyltransferase domain 4 557 727 IPR035369 -
Trre9g01042 1041 Pfam Nrap protein domain 3 376 531 IPR035368 -
Trre9g01042 1041 FunFam Nucleolar protein 6 205 375 - -
Trre9g01042 1041 Gene3D - 209 375 - -
Trre9g01042 1041 Pfam Nrap protein domain 6 893 1031 IPR035371 -
Trre9g01042 1041 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 2 1032 IPR005554 -
Trre9g01042 1041 Pfam Nrap protein PAP/OAS1-like domain 5 730 878 IPR035370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01042 Trre-Chr9 8282565 8290380 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01042 K14544 - gmx:100776157 1729.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01042 9 8282565 8290380 Trre9g01042 9 8282565 8290380 ECH