Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01004 ATGGCTGCTCTTCTCGGATCAAACATAGCAAGCGAGGTTGGACTCCGTTTACTCCTTTGTCCTCTTGGTTCCAACGTTGTTGTTCGAACCGCATGTTGTTCTGTTGGAATTGCTTTGCCTGTGTACTCTACATTCAAGGCAATTGAAAGTAAAAATCAAGATGATCAACAAAGATGTCTTGTATACTGGGCTGCCTTTGGCTCATTCAGCCTCGTTGAAGTATTCACGGACAAGCTTATTTCATGGGTTCCTATGTACTATCACGTCAAGTTTGCATTTCTTGTTTGGCTTCAACTTCCGCCTACTAATGGAGCAAAACAGATATACAGGAACCACATTCGCCCCTTCTTGTTAAAGCATCAAGGGAGTGTTGATCGCGTTTTAGGGCTTGCATATTGTGAAGTGATCAAACTTGTCAGTTCATATCAAAAAGAGATCAAGTCGGTCAAGACCATGGTAGGAAAGATAACCGAATCAGCTGATAAAATGTTGAGAAGTCCCCCTACTGCATCAGATAGATCATCGCAACATAGTTCAGTTGATGAATCTGCCACGCCGCCATCCGATGCCGAGCCTGGCCAAAATGATAGCTAA 594 0.4343 MAALLGSNIASEVGLRLLLCPLGSNVVVRTACCSVGIALPVYSTFKAIESKNQDDQQRCLVYWAAFGSFSLVEVFTDKLISWVPMYYHVKFAFLVWLQLPPTNGAKQIYRNHIRPFLLKHQGSVDRVLGLAYCEVIKLVSSYQKEIKSVKTMVGKITESADKMLRSPPTASDRSSQHSSVDESATPPSDAEPGQNDS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01004 197 PANTHER HVA22-LIKE PROTEINS 28 130 IPR004345 -
Trre9g01004 197 MobiDBLite consensus disorder prediction 160 197 - -
Trre9g01004 197 MobiDBLite consensus disorder prediction 168 197 - -
Trre9g01004 197 Pfam TB2/DP1, HVA22 family 40 116 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01004 Trre-Chr9 7893349 7896756 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01004 K17279 - gmx:100808008 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01004 9 7893349 7896756 Trre9g01004 9 7893349 7896756 ECH