Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01000 ATGGGAAAAGGAGGAGGCTGTGTTCCCAGCAAGAAACGAGAACCACCGGTAACCGACAAATTTCCGCCGCCGAGCACCACCACTGAATCCAACAACTCAATCCAAGAAACACCATTACCACCACCAACAACAACCGATTCAAAATCCAAAATCTTCATCGTTTTCTATTCGATGTACGGTCACGTCGAAGGGTTAGCGAAGAGGTTGAAGCAAGGTGTGGATGCTGTTGATGGTGTTGAAGGGGTTTTGTACAGAGTACCTGAGACATTGTCGATTGAGGTCTTGAATCAGATGAAAGCACCGGTTAAAGATGAAACTATTCCGGTTATATCGCCAGAGGAGCTTATTGATGCTGATGGTGTTTTGTTTGGGTTTCCTACTAGGTATGGTTCTATGGCTGCGCAGATGAAGGCTTTTTTTGACTCTACTGGGAGTTTGTGGCAGGGGCAGAAGCTCGCCGGAAAACCTGCCGGATTCTTTGTTAGTACCGGGACTCAAGGTGGCGGTCAAGAAACCACTGCTTGGACGGCGATCACTCAGCTGGCACATCAAGGAATGCTATTTGTTCCAATTGGATATACATTTGGACCTGGAATGTTCAATATGGACAACATTAGAGGTGGTTCTCCATATGGTGCAGGCGTGTTTGCAGGTGATGGCACAAGAGAGCCAAGCGAAACAGAACTTGCACTTGCCGAGCATCAGGGCAAGTATATGGCTGCCATAGTCAAGCGACTCGCCAAGTCCTGA 750 0.4787 MGKGGGCVPSKKREPPVTDKFPPPSTTTESNNSIQETPLPPPTTTDSKSKIFIVFYSMYGHVEGLAKRLKQGVDAVDGVEGVLYRVPETLSIEVLNQMKAPVKDETIPVISPEELIDADGVLFGFPTRYGSMAAQMKAFFDSTGSLWQGQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHQGMLFVPIGYTFGPGMFNMDNIRGGSPYGAGVFAGDGTREPSETELALAEHQGKYMAAIVKRLAKS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01000 249 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 48 248 - -
Trre9g01000 249 SUPERFAMILY Flavoproteins 50 246 IPR029039 -
Trre9g01000 249 Gene3D - 46 247 IPR029039 -
Trre9g01000 249 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 50 246 IPR010089 GO:0003955|GO:0010181
Trre9g01000 249 Pfam NADPH-dependent FMN reductase 65 190 IPR005025 GO:0016491
Trre9g01000 249 ProSiteProfiles Flavodoxin-like domain profile. 51 239 IPR008254 GO:0010181
Trre9g01000 249 MobiDBLite consensus disorder prediction 1 45 - -
Trre9g01000 249 MobiDBLite consensus disorder prediction 23 45 - -
Trre9g01000 249 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 50 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01000 Trre-Chr9 7844541 7847260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01000 K03809 - atr:18421453 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01000 9 7844541 7847260 Trre9g01000 9 7844541 7847260 ECH