Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00999 ATGGCGGCAGAAACACTCTCTGCTTTGAGGTCTTTGATGGCTTCTCACTCTCCACCTCTTCATGCCTTAGTGGTTCCTTCTGAAGATTATCATCAGAGTGAATATGTATCTGCACGTGATAAGCGTCGCGCATTTGTTTCTGGATTCACCGGTAGTGCTGGTTTGGCACTTATTACAAAGGATGAAGCACTGCTTTGGACCGATGGACGCTATTTTTTGCAAGCTGAACAACAGCTTAGTGCTCAGTGGAAGCTAATGCGTCTTGCTGAAGATCCTGCTGTAGATATCTGGATGGCTGATAACTTGCCAAAAGATGCAGCAATTGGGGTTGACCCTTGGTGCATTTCAATCGATACTGCTCAAAGATGGGAACGTGCTTTTGCCAAAAAACAGCAGAAGCTGGTGCAAACAACAAAAAATTTGGTGGACGAAGTATGGACAACTCGTCCACGAGAAGAAATTAATCCTGCCGTTGTACAACCATTAAAGTTTGCTGGTCGCTCTGTCACTGATAAGTTGAAAGATTTGAGAAAGAAGCTTGCACAGGAGCATGCTCGAGGAATAATTTTTACAGCACTCGATGAAGTTGCTTGGCTGTATAATATTCGTGGAAAAGATGTGGCATATTGTCCTGTTGTTCACGCGTTTGCTATTGTGACATCCAATAATGCCTTCATTTATGTGGACAAGCGAAAGGTGTCTAATGAGGTTAAAACTCATTTAGAAGAGAATGGAATTGAAATTAAAGAGTACACAGAAGTAAGCTTAGACGCGGCATTGCTTGCAACTGATGAGCTTGATTACGTGTCTACTGCCAAGGGTAGTCTAGCGGAAGTTACGAAGGAATCTGAAAACTTACCCAATGAAACCAATAAGATTGTAAATGGTAGACATCAAACAGGAGAAAAGAGTAGCAATCTCATATGGGCTGATCCAGGTTCATGCTGTTATGCTTTGTATTCAAAACTGAACCCTGATACAGTTCACTTGCAGCAATCACCTCTGGCTCTTCCAAAAGCTTTAAAGAACTCTGTGGAATTGGATGGGTTAAGAAAGGCACATATTCGGGATGGCGCGGCTGTTGTGCAATATCTTGTTTGGCTGGATAAGAAGATGCAAGATATTTATGGAGCATCTGGATACTTTTTAGCGGAGAATACTATAAAAAAGGAGAAACATTTGCAGTCCTTGAAATTGACTGAGGTGACTGTAAGTGACAAGCTTGAAGAATTTCGAGCATCAAAAGAGCATTTCAGAGGATTGAGTTTCCCTACCATTTCCTCAGTTGGCCCAAATGCAGCTATTATTCATTATTCCCCAGAGGCAGAAACATGTGCTGAGCTTGATCCAGACAAAATTTATCTTTTTGATTCTGGAGCCCAGTATGTGGATGGAACAACTGATATTACACGAACAGTTCATTTCGGGAGACCTTCGGATCATGAGAAAGCATGTTATACAGCGGTCCTGAAGGGTCACATTGCTCTGGGCAATGCTATATTTCCTAATGGGACAAATGGTCACTCACTTGATATTCTTGCTCGAATTCCTTTGTGGAAGTATGGTCTTGATTATCGACATGGAACTGGTCACGGTATTGGGTCCTACCTGAATGTCCATGAAGGACCTCATTTAATCAGTTTCAGAACACGAAATGTACCGCTGCAATCTTCCATGACCGTTACAGATGAACCTGGTTACTATGAGGACGGAGCATTTGGGATAAGATTGGAGAATGTTCTTGTGATCAACAAGGCTGATACCGAATATAATTTTGGTGATAAAGGTTACTTATCATTTGAGCATATTACCTGGGCACCATATCAAACAAAGTTGATTGACCTGAACCTTCTAAATCCAGAAGAGAAAAAATGGTTGAACTCCTATCATTCGAAGTGTAGAGATATTTTGGCGCCATATTTGGATGAAGCTGAAAGTGCATGGCTGAAGAAAGCCACAGAACCTGTAATCGTGTGA 1977 0.4178 MAAETLSALRSLMASHSPPLHALVVPSEDYHQSEYVSARDKRRAFVSGFTGSAGLALITKDEALLWTDGRYFLQAEQQLSAQWKLMRLAEDPAVDIWMADNLPKDAAIGVDPWCISIDTAQRWERAFAKKQQKLVQTTKNLVDEVWTTRPREEINPAVVQPLKFAGRSVTDKLKDLRKKLAQEHARGIIFTALDEVAWLYNIRGKDVAYCPVVHAFAIVTSNNAFIYVDKRKVSNEVKTHLEENGIEIKEYTEVSLDAALLATDELDYVSTAKGSLAEVTKESENLPNETNKIVNGRHQTGEKSSNLIWADPGSCCYALYSKLNPDTVHLQQSPLALPKALKNSVELDGLRKAHIRDGAAVVQYLVWLDKKMQDIYGASGYFLAENTIKKEKHLQSLKLTEVTVSDKLEEFRASKEHFRGLSFPTISSVGPNAAIIHYSPEAETCAELDPDKIYLFDSGAQYVDGTTDITRTVHFGRPSDHEKACYTAVLKGHIALGNAIFPNGTNGHSLDILARIPLWKYGLDYRHGTGHGIGSYLNVHEGPHLISFRTRNVPLQSSMTVTDEPGYYEDGAFGIRLENVLVINKADTEYNFGDKGYLSFEHITWAPYQTKLIDLNLLNPEEKKWLNSYHSKCRDILAPYLDEAESAWLKKATEPVIV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00999 658 CDD APP 349 593 IPR033740 GO:0070006
Trre9g00999 658 FunFam Xaa-pro aminopeptidase P 1 146 - -
Trre9g00999 658 Pfam Metallopeptidase family M24 350 584 IPR000994 -
Trre9g00999 658 SUPERFAMILY Creatinase/aminopeptidase 343 622 IPR036005 -
Trre9g00999 658 PANTHER XAA-PRO AMINOPEPTIDASE 1 2 656 - -
Trre9g00999 658 Pfam Creatinase/Prolidase N-terminal domain 149 346 - -
Trre9g00999 658 Pfam C-terminal region of peptidase_M24 597 655 IPR032416 -
Trre9g00999 658 Gene3D - 1 146 IPR029149 -
Trre9g00999 658 SUPERFAMILY Creatinase/prolidase N-terminal domain 42 132 IPR029149 -
Trre9g00999 658 Gene3D - 147 337 IPR029149 -
Trre9g00999 658 Gene3D Creatinase/methionine aminopeptidase superfamily 340 658 IPR036005 -
Trre9g00999 658 FunFam Xaa-Pro aminopeptidase P 340 656 - -
Trre9g00999 658 Pfam Creatinase/Prolidase N-terminal domain 6 143 IPR000587 -
Trre9g00999 658 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 527 539 IPR001131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00999 Trre-Chr9 7836269 7842641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00999 K01262 - gmx:100803268 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00999 9 7836269 7842641 Trre9g00999 9 7836269 7842641 ECH