Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00979 ATGCAGCCCTCATATTGCTTGAAGGAAAATAAACCATGTGTTGGTTGGGTTCAAAATTACTTCAGTGACTGTCTATGTAATCTTAATGATGAAATTTCATTCACTTTTGGTTTTATAAGTTTAATTTGTTGGGGTGTTGCTGAAATTCCTCAGATTATCACTAATTTTCGTGCTAAGTCTAGCCATGGTGTTTCTATTGTTTTTCTCCTCACTTGGGTTGCTGGAGACATATTTAACCTTGTGGGTTGTCTTCTAGAGCCAGCTACGTTGCCAACACAATACTACACAGCTCTGCTTTACACAATCACTACGATCGTCTTAGTTTTGCAAAGCTTCTATTATGACTACATTTACAAATGTTGCAAGCGTCGTCAAAAGACCAACACCGAAGAGGCTTATGAAGAAGAGAAAAAACCATTGAAACCAAAACAAGGGAATTATGAATCAGGGATTCCAATAAGAAGTGGAAAACACAGAGTAATACCTAGACCAGAGTATTACTATGGGTCAGCTAGATCATTGGCTGGTAATGTTACTCCACCGTCTCACACTTACATGAGAGTTGCTAAAAGTGGACCTTCGGCTATGGGATTGAACGAAGATTCGTCGTCTTCTGATGATGAGGCACACTCAGTTCCTGCAACACAACCGAGACAAATTCCTCGTTCTGCGGGAACCTATGGAACATTTCTAGCCGCATCGATTAACTTGCCTATGCAGGGTAATGCTTTGATAGTCGGATACATGAGACTGAGTGGAAGAAAACTACTCTCACAAGAACATGTAGCACACAGTGCATTGGGTCAATGGTTGGGATGGCTTATGGCTGCTATCTATACCGGCGGTCGCATACCTCAAATATGGTTAAATATCAAAAGAGGGAGTGTTGAGGGGCTAAATCCTTTCATGTTCATCTTTGCGCTGATTGCCAATGCCGCTTATGTGGGAAGTATTCTTGTACGAACTACGGAATGGGAAAGCATCAAAGCTAACATGCCATGGTTATTGGATGCCATTGTTTGTGTGGCATTGGACCTATTTATAATATTGCAGTACATCAATTACAGATACCATAGAAAGAACCCTCCAAGTGATTATGGTAATTGTGATGACTACAAAAAAGCCAGAAATACTATTGTTTCTTGA 1146 0.404 MQPSYCLKENKPCVGWVQNYFSDCLCNLNDEISFTFGFISLICWGVAEIPQIITNFRAKSSHGVSIVFLLTWVAGDIFNLVGCLLEPATLPTQYYTALLYTITTIVLVLQSFYYDYIYKCCKRRQKTNTEEAYEEEKKPLKPKQGNYESGIPIRSGKHRVIPRPEYYYGSARSLAGNVTPPSHTYMRVAKSGPSAMGLNEDSSSSDDEAHSVPATQPRQIPRSAGTYGTFLAASINLPMQGNALIVGYMRLSGRKLLSQEHVAHSALGQWLGWLMAAIYTGGRIPQIWLNIKRGSVEGLNPFMFIFALIANAAYVGSILVRTTEWESIKANMPWLLDAIVCVALDLFIILQYINYRYHRKNPPSDYGNCDDYKKARNTIVS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00979 381 MobiDBLite consensus disorder prediction 193 221 - -
Trre9g00979 381 MobiDBLite consensus disorder prediction 196 221 - -
Trre9g00979 381 FunFam Vacuolar membrane PQ loop repeat protein 267 365 - -
Trre9g00979 381 MobiDBLite consensus disorder prediction 131 154 - -
Trre9g00979 381 Pfam PQ loop repeat 32 88 IPR006603 -
Trre9g00979 381 Pfam PQ loop repeat 267 325 IPR006603 -
Trre9g00979 381 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
Trre9g00979 381 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 359 - -
Trre9g00979 381 Gene3D - 268 363 - -
Trre9g00979 381 Gene3D - 33 134 - -
Trre9g00979 381 SMART ctns 281 312 IPR006603 -
Trre9g00979 381 SMART ctns 46 77 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00979 Trre-Chr9 7609777 7615983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00979 K23678 - gmx:100780977 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00979 9 7609777 7615983 Trre9g00979 9 7609777 7615983 ECH