Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00668 ATGGCTACAACGACGAACTTGTTAGAGACATTAGGAAGTTTAGAGAGGGATTCATTTGTATCTCTTCTCTCCAACTTGATGAGTGAATCCAAATACTTGCAGAACAATCCACCAGAACTCATTCCTGAAGAGGATAGAGTAGTGAACCATGTTTTAAACTCCCTCTTATCGTTAAGCACCGCCACCGGTGGTGGCCCTTTAATCCTCAACCATGTTACCTATTTTCCCGGTAGAGGTAACCTCATTGTTGAATATCCTGGAAGTGTTCCCGGAAAGATCTTCTCCTTTGTTGGTTGTCACATGGACGTCGTCACTGCAAATCCCGATGATTGGGATTTTGATCCGTTTACTTTGAGCATCGATGGTGATAAACTCGGGGGTCGAGGAACTACTGATTGTTTGGGACATGTCGCACTTGTTACCGAATTGATGAAGAAACTAGGTGAAACTAAGCCGGATTTGAAATCAACTGTTGTTGCTGTTTTTATAGCAAATGAAGAGAGTTCTGTTATAACTGGAGTTGGTATTGATGCACTTGTTCAAGATGGTCTTCTCAATAAGCTAAAGGAAGGTCCCATGTTTTGGATCGACACCGCTGATAAACAACCATGTGTTGGAACTTCTGGTATGATACCTTGGAAACTTCATGTCACTGGGAAACTTTTTCATAGCGGATTATGCGACAAGGCTATAAATCCATTGGAGCTAGCCATGGATGCTATAAAGGAAATCCAGCTGAAATTTTACAAGGATTTCCAACCTCATCCTCATGAACAAGTTTATGGTTTTACAATCCCTTCAACCATGAAACCAACTCAATGGAGTTATCCTGGAGGTGTAATCAACCAAATTCCTGGAGAATGTACTATTTCAGGAGATGTCAGGTTAACTCCATTCTACAATGTGAAGGATGTAATGAAGAAGCTGCATGAATACGTGGACGACATCAATGAGAATATACAGAAGCTAGAAACTCGAGGTCCGGTTTCAAAATATGTCCTATCTGATGAAAATTTAAGGGGGAGTCTCACTCTATCTTTTGATGAGGTTTCGTCCGGAGTTGCTTGTGATCTCAACTCTAGAGGTTTTCATGTTTTATGCAAAGCAACTGAGGAAGTAGTTGGGAATGTAAAGCCTTTCTCAGTTGCAGGGAGTTTACCTCTCATTAAGGAACTTCAGGATGAAGGTTTTGATGTTCAGGCTTGTGGATATGGTTTGATGGAAACTTACCATGCCAAGAACGAGTATTGTCTATTTACAGATATGTCCCAAGGATACTGGGTGTTAGCGAGCATCATCGCTCAATTAGAAGATTGA 1317 0.4115 MATTTNLLETLGSLERDSFVSLLSNLMSESKYLQNNPPELIPEEDRVVNHVLNSLLSLSTATGGGPLILNHVTYFPGRGNLIVEYPGSVPGKIFSFVGCHMDVVTANPDDWDFDPFTLSIDGDKLGGRGTTDCLGHVALVTELMKKLGETKPDLKSTVVAVFIANEESSVITGVGIDALVQDGLLNKLKEGPMFWIDTADKQPCVGTSGMIPWKLHVTGKLFHSGLCDKAINPLELAMDAIKEIQLKFYKDFQPHPHEQVYGFTIPSTMKPTQWSYPGGVINQIPGECTISGDVRLTPFYNVKDVMKKLHEYVDDINENIQKLETRGPVSKYVLSDENLRGSLTLSFDEVSSGVACDLNSRGFHVLCKATEEVVGNVKPFSVAGSLPLIKELQDEGFDVQACGYGLMETYHAKNEYCLFTDMSQGYWVLASIIAQLED 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00668 438 Gene3D Zn peptidases 12 199 - -
Trre9g00668 438 Coils Coil 306 326 - -
Trre9g00668 438 FunFam Acetylornithine deacetylase, putative 13 204 - -
Trre9g00668 438 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 319 IPR036264 -
Trre9g00668 438 Pfam Peptidase family M20/M25/M40 97 434 IPR002933 GO:0016787
Trre9g00668 438 Pfam Peptidase dimerisation domain 205 318 IPR011650 -
Trre9g00668 438 PANTHER ACETYLORNITHINE DEACETYLASE 4 437 - -
Trre9g00668 438 SUPERFAMILY Zn-dependent exopeptidases 15 436 - -
Trre9g00668 438 Gene3D - 208 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00668 Trre-Chr9 4823534 4826130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00668 K01438 - gmx:100814676 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00668 9 4823534 4826130 Trre9g00668 9 4823534 4826130 ECH