Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00595 ATGGATGACACGAAGAAGAACATTTTCGGCGATGATTCCGACAACGAAAAAGATGGGACCCACTCTTCTTCCCCTTCTTCTTCTTCCTCCGCCGCTTCATCTTCCTCTTCTTCATCTTCTTCCGCTTCTTCTTCCAACAACACCAAAGGTTCCGCCGATTCATCTTCCGGCACCGGAACTGCCAGCAGCGGCGGTGGCGGTGGTGGTGATGATGAAGAAAACGGTGATGTTGTTGATAGTAGTATTAAGGCTGATTCTCATCAATATGATGATGATCATCATCATGATTATAATGATCATGAATATGGAGATCTGTTTGCTTCTGATAATGAAGATTTCTCCAAAACCCTCGCTAAAAGTTCTCACTCTATTCCTGTATTACCTGCCGTCCGCAACAATACGAACAACCCGGGAAGAGGGGGTTTTGGCCGTGGTCGTTGGCAGCAAGGGCATCATAATGATAGAGGAGCTGGCATTCTTCCGCGTCCTGGACCTTATCCTCAGAGGCAGAATTTCGGGTATGGTAATAGGTATCAGAATGGCCGCCACGACGAGCGATTTGTCTCTGAGATGAAGCTCTCAAAGAGTGAAGAAACTCTATCAAGAAAAGCCATTGCTTTTCAGGAGCCTTGTGAACTTGCCTGCTATAGTCGTGTAGAAGGTGGGGAAGTACATTTTGATGACCGTAGCTTGAGACTTTTTAAACGCCATATCACTGAAGATATTGGAGCTGATTTGAACGAAGGTTATGATACATACATTCCCAAAAAAGACTTAGGTTCAGAGGGCTTTGGCGATCTTCTTGCTTGCATTAGAGATAAACAAATCCCGCTTCAAAACATTCATTTTGTGACGTACCGCAACAATCTTAACAAGATACTGGCTACAGCGTATATTCGTCACGAACCTTGGGAAATGGGAGTACACAAAAGAAACGGTGTTGTCTATCTCGATGTGCACAAGTTACCAGAAAGACCACAAAGTGATTTAGATCGTAGGAGATGTTATCTGGGATACGGTTTTGAGAGCCTTGCCACCGAAGATCCTAAAAGAGCTGATGGAGAGGGGGTGCATCATGTTGATGCCAATGTTGAATTTTGTTCGGTGATTAAGACAAAATTGGGAGCTCACCGTATCTTGATGGGTGCTGAGATGGATTGCTGTGATACCACTAATGATGGAAAGAGATTTTATGTGGAGTTAAAGACAAGTTATGAGTTGAATTATCATAACGAAGAAAAATTTGAGAGAGAGAAACTGCTAAAGTTTTGGATTCAGTCATTCTTGGCAGGTGTCCCTTATATTTGTATAGGATTTAGGGATGATGCTGGTCGTCTTGTTCGGACAGAAATGCTTAGAACCAAAGATATTACGCAGAGAATAAAAATGAAGAGCTATTGGCAGGGGGGAGTCTGCCTTGCGTTTGCGGATGAGGTATTGTGCTGGCTTTATGGAACAGTTAAAGAAAATGAAGATTACATATTGCAGTTCGCTCCACCTTTCAACCGTTTGGAACTTCTGCAAGCTCAGTCTTGCCCAGATGTAATAACAAGTCATTTGGAACTGTTGTGA 1572 0.4326 MDDTKKNIFGDDSDNEKDGTHSSSPSSSSSAASSSSSSSSSASSSNNTKGSADSSSGTGTASSGGGGGGDDEENGDVVDSSIKADSHQYDDDHHHDYNDHEYGDLFASDNEDFSKTLAKSSHSIPVLPAVRNNTNNPGRGGFGRGRWQQGHHNDRGAGILPRPGPYPQRQNFGYGNRYQNGRHDERFVSEMKLSKSEETLSRKAIAFQEPCELACYSRVEGGEVHFDDRSLRLFKRHITEDIGADLNEGYDTYIPKKDLGSEGFGDLLACIRDKQIPLQNIHFVTYRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYLGYGFESLATEDPKRADGEGVHHVDANVEFCSVIKTKLGAHRILMGAEMDCCDTTNDGKRFYVELKTSYELNYHNEEKFEREKLLKFWIQSFLAGVPYICIGFRDDAGRLVRTEMLRTKDITQRIKMKSYWQGGVCLAFADEVLCWLYGTVKENEDYILQFAPPFNRLELLQAQSCPDVITSHLELL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00595 523 MobiDBLite consensus disorder prediction 20 63 - -
Trre9g00595 523 MobiDBLite consensus disorder prediction 1 78 - -
Trre9g00595 523 PANTHER DOM-3 RELATED 1 511 IPR039039 -
Trre9g00595 523 MobiDBLite consensus disorder prediction 1 19 - -
Trre9g00595 523 MobiDBLite consensus disorder prediction 127 164 - -
Trre9g00595 523 Pfam RAI1 like PD-(D/E)XK nuclease 385 447 IPR013961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00595 Trre-Chr9 4249753 4254133 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00595 K14845 - gmx:100798780 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00595 9 4249753 4254133 Trre9g00595 9 4249753 4254133 ECH