Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00574 ATGGCTACAACAACCTCGTCTTTTATGTTTCTTAAACTTCCTACCTCATTTCCATGTCATACCAGACTTGGATCCCTCAGAAGTTCCAAATTAATCAAGGCTCAATCTTCTGATGTCCAAAAAGAACATGTTGTCATTGTAGGTGGTGGAATTGCAGGTCTTGCAACTGCACTATCCCTTCACAGGCTTGGTGTTCGGTCTCTTGTACTGGAACAGTCAGAGTCACTTCGAACTGGTGGAACTTCACTCACCCTTTCCAAGAATGGGTGGAGTGTGCTTGATTCAATTGGAGTAGCAAATTATCTCAGAACTCAATATTTAGAAATTCAAGGGATAGTGCTGAAGTCTGAAGATGGAAGAGAATTACGTGCCTTCAATTTCAAAGAAGAGGACGAAAGCCAGGAGTTGCGTGCAGTGGAGAGGAGGGTGCTTTTGGAAACCTTGGCTGCTGAGCTACCTCCAGATACCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTTCAAATGGGGATACCTTATTGGAATTCACGAATGGTTCTAAACTACTTGCACAGATTGTAATAGGGTGCGACGGAATTCGATCACCTATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTTCGTTGGCCATTGTGCGTTTCGTGGACTTGCCTCGTACTCAGATGGACAACCTTTTAAACCACGAGTGAATTACATCTATGGAAAAGGGTTGCGCGCAGGATATGTTCCTGTTTCTCCTACCAAAGTGTATTGGTTTATCTGCTTCAACAGTTCATCTCCAGGTCCTAAAACAACCGATGCATCGATACTAAAGAAGGAAGCTAAGGAATTAGTAGAAAACTGGCCTCCAGAGCTATTAAACATAATGGATTCTACGCCAGATGACACTATAATCAGGTCTCCATTGGTGGATAGGTGGCTTTGGCCAACGATAAGTCCGGCTGTTTCTGCAGGTAGAGTTGTGCTCGTTGGAGATGCTTGGCATCCAATGACTCCAAATCTCGGACAAGGAGCTTGTTGTGCACTTGAGGATGCAGTCATTCTTGCTAAAAAGCTTGCTGGAGCCATCAACTCTGGTGACAGTTCTGTCGAAGAAGCTTTTAGATCATATGGCAACGAAAGATGGCCGCGAGTATTTCCACTAACCATTCGAGCAAACCTTGTGGGTTCTGCTTTGCAGTGGGATAACCCGGTGATGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTAAGGCTTGGTCCTTTGCTAGAGCACACAAATTTTACTAGTGAGAGTCTATAA 1296 0.4383 MATTTSSFMFLKLPTSFPCHTRLGSLRSSKLIKAQSSDVQKEHVVIVGGGIAGLATALSLHRLGVRSLVLEQSESLRTGGTSLTLSKNGWSVLDSIGVANYLRTQYLEIQGIVLKSEDGRELRAFNFKEEDESQELRAVERRVLLETLAAELPPDTIQYSSRLVKIEPSSNGDTLLEFTNGSKLLAQIVIGCDGIRSPIAKWMGFSEPKFVGHCAFRGLASYSDGQPFKPRVNYIYGKGLRAGYVPVSPTKVYWFICFNSSSPGPKTTDASILKKEAKELVENWPPELLNIMDSTPDDTIIRSPLVDRWLWPTISPAVSAGRVVLVGDAWHPMTPNLGQGACCALEDAVILAKKLAGAINSGDSSVEEAFRSYGNERWPRVFPLTIRANLVGSALQWDNPVMCSVRNNIVIPKLVRLGPLLEHTNFTSESL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00574 431 Gene3D - 43 410 IPR036188 -
Trre9g00574 431 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 42 427 IPR044560 -
Trre9g00574 431 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 43 65 - -
Trre9g00574 431 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 185 200 - -
Trre9g00574 431 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 335 - -
Trre9g00574 431 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 335 351 - -
Trre9g00574 431 Pfam FAD binding domain 43 380 IPR002938 GO:0071949
Trre9g00574 431 SUPERFAMILY FAD/NAD(P)-binding domain 43 409 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00574 Trre-Chr9 4124976 4126923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00574 42 410 Miscellaneous Gene Families AT5G05320 33.596 2.18e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00574 - - ccaj:109794397 691.419