Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00490 ATGTCCACCGCAACTCCACTACTCACACCGCGCCACGTGGCAGTAATCGGCGCCGGCGCCGGAGGTCTAGTTGCAGCGCGCGAGCTCCGACGAGAAGGACATCAGGTAGTTGTTTTCGAGCGAGGAGACCAACTAGGCGGGTCATGGGTTTACACTCCAGAGGTAGAATCCGACCCACTTGGTTTGGACCCGAAGCGGAAGTTAGTTCACTCGAGCCTATACAATTCACTCCGAACCAATCTGCCTCGGGAGAGTATGGGTTTCCGAGATTACCCTTTTAGAAGAAAAGAAGAGAAAGGAAGAGATTCTAGAAGGTTCCCGAGTCATAGAGAAGTTTTGATGTATTTGCAGGATTTTGCTGCGGATTTTGAGATTGATGATTTGGTGAGGTTTGAGACGGAGGTGGTGTATGCTGGGTTGGGTGAAGGTGGAAAATGGACGGTGAGATCTAGATCGGTTGATAGTGATTGTGTGGATGAGATTTATGATGCTGTTGTTGTTTGCAATGGACATTACTTTCAACCTCGACTTCCTCATATCCCTGGTATTAATGCATGGCCAGGGAAGCAAATGCATAGCCATAATTACAGGACACCTGAGCCCTTTCAAGATCAAGTTGTAGTTCTAATAGGTGGTGCTGCCAGTGCGGTCGATATCTCTCGAGATGTGGCAACCGTTGCTAAAGAAGTTCACATTGCAGCTAGATCCATTGAAGAAGATAAGCTTGGAAAGTTACCTGGCCATGATAATATGTGGCTTCATTCTATGATTGAAAGTGTTCATGAAGATGGTACAGTGGTTTTCCTAGATGGAAATGCAGTAGTTGCTGATTTCATTGTACATTGCACAGGGTACAAGTTTGATTTTCCTTTCCTTGAAACCAACGGTGTAGTGACCGTAGATGACAATCGTGTAGGACCACTCTACAAGCATGTTTTCCCACCGGCGCTAGCACCATGGCTTTCATTTGTTGGGTTGCCTTGGAAGGTTGCTCCCTTCCCATTGTTTGAACTGCAGAGCAAGTGGATAGCTGGAGTTTTGTCTAATCGCATTGCACTTCCTTCTGCAGAGGAGATGGCCGAAGATATTGAAGCTTTTTACTCGTCACTGGAAGCATCTGGCATTCCGAAGAGTTACACTCATAATATGAGCGCGGGCCTTACTCAGTGGGACTACAATAATTGGATTGCAGATCAGTGTGGTGTTCCTGCTATGGAAGAATGGAGAAGGGAAATGTATATGGCTACATCTAAGAACAGGCTCTTGCGACCTGAGACTTATCGCGACGAGTGGGATGATGATGAACTGGTTCTACAAGCTGAACATGAATTTGCTAATTATAAGATCTAA 1350 0.4615 MSTATPLLTPRHVAVIGAGAGGLVAARELRREGHQVVVFERGDQLGGSWVYTPEVESDPLGLDPKRKLVHSSLYNSLRTNLPRESMGFRDYPFRRKEEKGRDSRRFPSHREVLMYLQDFAADFEIDDLVRFETEVVYAGLGEGGKWTVRSRSVDSDCVDEIYDAVVVCNGHYFQPRLPHIPGINAWPGKQMHSHNYRTPEPFQDQVVVLIGGAASAVDISRDVATVAKEVHIAARSIEEDKLGKLPGHDNMWLHSMIESVHEDGTVVFLDGNAVVADFIVHCTGYKFDFPFLETNGVVTVDDNRVGPLYKHVFPPALAPWLSFVGLPWKVAPFPLFELQSKWIAGVLSNRIALPSAEEMAEDIEAFYSSLEASGIPKSYTHNMSAGLTQWDYNNWIADQCGVPAMEEWRREMYMATSKNRLLRPETYRDEWDDDELVLQAEHEFANYKI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00490 449 Gene3D - 179 282 IPR036188 -
Trre9g00490 449 PANTHER DIMETHYLANILINE MONOOXYGENASE 11 432 - -
Trre9g00490 449 SUPERFAMILY FAD/NAD(P)-binding domain 252 436 IPR036188 -
Trre9g00490 449 Gene3D - 13 430 IPR036188 -
Trre9g00490 449 SUPERFAMILY FAD/NAD(P)-binding domain 9 236 IPR036188 -
Trre9g00490 449 PRINTS Flavin-containing monooxygenase (FMO) signature 11 27 IPR000960 GO:0050660|GO:0050661
Trre9g00490 449 PRINTS Flavin-containing monooxygenase (FMO) signature 269 296 IPR000960 GO:0050660|GO:0050661
Trre9g00490 449 PRINTS Flavin-containing monooxygenase (FMO) signature 35 59 IPR000960 GO:0050660|GO:0050661
Trre9g00490 449 PRINTS Flavin-containing monooxygenase (FMO) signature 191 205 IPR000960 GO:0050660|GO:0050661
Trre9g00490 449 PRINTS Flavin-containing monooxygenase (FMO) signature 218 233 IPR000960 GO:0050660|GO:0050661
Trre9g00490 449 PRINTS Flavin-containing monooxygenase (FMO) signature 334 347 IPR000960 GO:0050660|GO:0050661
Trre9g00490 449 FunFam Flavin-containing monooxygenase 179 282 - -
Trre9g00490 449 Pfam Flavin-binding monooxygenase-like 11 236 IPR020946 GO:0004499|GO:0050660|GO:0050661
Trre9g00490 449 Pfam Flavin-binding monooxygenase-like 255 365 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00490 Trre-Chr9 3497897 3500713 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00490 - - gmx:100793203 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00490 9 3497897 3500713 Trre9g00490 9 3497897 3500713 ECH