Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00486 ATGGCACTTAATTCATTCTCACCACTTTCAATTAATTCTCACCATGTTTCCTCTTATCCTTCAAGTTCAAAGATTTCAAACACACTTCATTTTCATTCAAAGTCCTCTCAAATTGTCTGCAAAATCAACTTAAACAATCATAATAATCCTCAAGAGTCCAACAAGAAATGGGGGAAACTTGTTTCAGCCACGTTGGCAGCTGCTGTTATTGTTTTCACCTCTGACATGTCTGCCCTTGCTGATCTTAACAAATTTGAGGCTGAAATTAGGGGTGAATTTGGTATTGGATCTGCTGCTCAATTTGGATCAGCAGACCTTAGCAAAACAGTGCATGTCAATGAAAATTTCAGAAGAGCAAATTTCACATCTGCTGATATGAGAGAATCCAATTTTAGTGGTTCTACTTTCAATGGCGCATATATGGAGAAAGCTGTTGCATACAAGGCAAATTTTACTGGTGCTGATTTGAGTGATACGTTGATGGATCGAATGGTTCTTAATGAAGCGAATCTGACGAATGCAATTCTTGCTAGAACAGTCCTCACACGGAGTGACTTAGGAGGCGCCGTCATTGAAGGAGCCGACTTTAGTGATGCTGTTTTGGACCTTCTCCAAAAGCAGGCTCTATGCAAGTATGCTAGTGGCACAAATCCTGTAACAGGAGTAAGCACAAGAGCGAGTTTAGGTTGCGGGAACAAACGACGAAATGCTTATGGCAGTCCATCATCTCCACTGTTGAGTGCTCCACCGCAAAAACTGCTCAACCGGGATGGTTTCTGCGATGAAGCAACTGGCCTTTGCGATTCGAAGTAG 813 0.4194 MALNSFSPLSINSHHVSSYPSSSKISNTLHFHSKSSQIVCKINLNNHNNPQESNKKWGKLVSATLAAAVIVFTSDMSALADLNKFEAEIRGEFGIGSAAQFGSADLSKTVHVNENFRRANFTSADMRESNFSGSTFNGAYMEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVLDLLQKQALCKYASGTNPVTGVSTRASLGCGNKRRNAYGSPSSPLLSAPPQKLLNRDGFCDEATGLCDSK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00486 270 Gene3D - 96 231 - -
Trre9g00486 270 Pfam Pentapeptide repeats (8 copies) 166 201 IPR001646 -
Trre9g00486 270 Pfam Pentapeptide repeats (8 copies) 124 160 IPR001646 -
Trre9g00486 270 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 58 269 - -
Trre9g00486 270 SUPERFAMILY Pentapeptide repeat-like 99 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00486 Trre-Chr9 3484074 3485793 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00486 - - gmx:100805220 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00486 9 3484074 3485793 Trre9g00486 9 3484074 3485793 ECH