Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00458 ATGGAGTGGCCTGCTTGTACGGATGAATATGAAAAGCTCTTAATTAGGATGAGTACTCCAAGGGTTGTTATTGACAATGCCGTGTGCTCCACTGCAACTCTGGTCAAGGTTATTAGCACAAGAAGACATGGTAGTTTACTTGATGCAATACAAGTTCTCATTGATCTTAATCTTGTAATTAAGAAGGCCTATATATCTTCTGATGGAAAATGGTTCATGGATGTTTTCCATGTCACTCATCAAAATGGAAGCAAGCTAATCGAAGAGAGCGTTTTAAAATATATAGAACAGTCACTTGGGAGCATTCACAATGTGAGAACTAGTTGCGCAGACGGTCTCACTACGCTTGAATTATCAGGAACCGATAGAGTTGGTCTTCTATCGGAGGTTTTTGCTGTACTTGCTGATCTTCAATGCGACGTGGTTGAGGCTAAGGTTTGGACTCACAATGGTCGCATTGCCTCTTTGATATATGTTAAAGACTGCGATTCTGGAACGACTATTGAGGATTCTCAGAAGATTAAAAAGATTGAAGTGCGTTTAAGAAACGTTTTGAAGGGAGACAATGACTTAAGAACCGCAAAGACTTCGGTCTCTATGTCTGTCATGCATAGTGAAAGAAGGTTGCATCAAATGATGTTCGCTGATCGTGACTACGAAAGGACTCCAATCCTTAAACGTATGTCTGATAACACTATAGTGACTGTCCAGAATTGGGCAGAAAGGGGTTATTCGGTTGTGAATGTTCAATGCAAGGATCGAATCAAACTATTATTTGATGTCGTATGCAATTTAACAGACATGGAGTATGTTGTGTTTCATGCAACCATCAACACGGATAGTAACGAAGCTTACTTGGAATTTTATATAAGACACAAGGATGGCACTCCAATTAGTTCAGAACCGGAGCGGCAACGCGTAATTCAATGTTTAAAAGCTTCAGTGGAAAGAAGGGCATCTGAGGGTGTTCAACTAGAGTTATGCACAGAAGACAAGAAGGGACTTCTAGCAGAAGTAATGAGAACGTTCCGCGAGAACGGGCTTAATGTTACAAGGGCTGAGATATCCACCGTAGAAAACATGGCAACAAATGTTTTCTATGTAACAGATGTGATTGGAAACCCAGCTGATCCAAAAATCATAGAGTCCGTTCGGCAGAAAATCGGGTCAAACAATTTAGAAGTGAAGGAGATACCATTGGTATATCATCAGAAGGCAGAAAGAGAGGATCAAACTGTTGGAGTTGGTGGAGCAGTGTTGTGGTCTATTGGGAACCTTGTGAGAAGAAATTTGTACAGTTTGGGATTAATTAAATCATGTTCTTAA 1326 0.4042 MEWPACTDEYEKLLIRMSTPRVVIDNAVCSTATLVKVISTRRHGSLLDAIQVLIDLNLVIKKAYISSDGKWFMDVFHVTHQNGSKLIEESVLKYIEQSLGSIHNVRTSCADGLTTLELSGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGTTIEDSQKIKKIEVRLRNVLKGDNDLRTAKTSVSMSVMHSERRLHQMMFADRDYERTPILKRMSDNTIVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTDSNEAYLEFYIRHKDGTPISSEPERQRVIQCLKASVERRASEGVQLELCTEDKKGLLAEVMRTFRENGLNVTRAEISTVENMATNVFYVTDVIGNPADPKIIESVRQKIGSNNLEVKEIPLVYHQKAEREDQTVGVGGAVLWSIGNLVRRNLYSLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00458 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Trre9g00458 441 SUPERFAMILY ACT-like 29 102 IPR045865 -
Trre9g00458 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Trre9g00458 441 Pfam ACT domain 325 375 IPR002912 -
Trre9g00458 441 Pfam ACT domain 114 164 IPR002912 -
Trre9g00458 441 CDD ACT_ACR_3 244 318 - -
Trre9g00458 441 CDD ACT_ACR_4 322 393 - -
Trre9g00458 441 Gene3D - 113 186 - -
Trre9g00458 441 Gene3D - 322 398 - -
Trre9g00458 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Trre9g00458 441 SUPERFAMILY ACT-like 320 388 IPR045865 -
Trre9g00458 441 SUPERFAMILY ACT-like 112 172 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00458 Trre-Chr9 3299597 3302021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00458 - - lja:Lj2g3v2002690.1 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00458 9 3299597 3302021 Trre9g00458 9 3299597 3302021 ECH