Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00423 ATGGATATGGCGGCATCTTCGTCTTCTTCCCCCCCAACGGACGAACCTCCTCAACATCACGATCTTCAACAACAACAACAACATCCTCCTCCTCCTCCACTCAAAGAATTTCTTCACAAAACCAAATTGATTCAATTTCTTGGTCGCACTACTCCGATCATCCTTCAAAACGACAATGGACCTTGTCCTCTTCTCGCTATCTGTAACGTTCTTCTGCTACGGAACCAGTTAAGCTTGGGCTCGGATATTACTGAAGTCTCACAGGAGAAATTGCTTTCATTGGTTGCTGAACGATTGATTGATTCAAATAGTAATGTGAATAACAAAGATGCAGGCTATGTCGAAAATCAACTACAGAACATTGCCGATGCAATTGATTTGCTCCCTAGACTTGCCACTGGAATTGATGTTAATCTAAAATTTACGGGAATACAAGATTTTGAATTCACTCCAGAGTGTGCCATATTTGATTTGCTGGACATCCCATTGTGTCATGGCTGGCTAGTTGATCCTCAGGATCATGATACTGCAACTGCAATTGGATCAAAGTCCTATAATGCCCTTATGGAAAAGCTTGTTTCTCTTGAAACACGGAACATTGAAATCCCACCGAAAAATAATCCAGAAGAAGATTGTGTTGATTTTGTGGCTGCAACAACTGCTGCTCTTGGAGTTCCTTCTCCCAGCCTTTCTAAAGCCAGGTCTTTTGATGATTCTCCACATTCTGTTTCTGATCAGGCACCAAGGAAAGGTGATCTTGAAGAAGAAGAAGAGTTGTTAAGAGCCTTGAAGTTGTCTGAGATTGATTCTAAAGCTTCAATAAGTGATCCTTTTGTGGGTCATGCAAATGATAATGGAGGGGAAGTTTCTTTTGGTATGGACGAAAATACGTGTAACAAACAGGCTGTAACCGTGGACTCTGGAGTTGACTTAGGAAAGAGCACTGGTAAAGAAAGCAATGATTTTCATGAATCAGAAACCGCCATACCTGATGATTGCACTGTTTCTAGCAAACACTATAATGAACATATATCTTCTACATCTACAGTGGGGGAAGCAGCCAATTCATCCTTAAAGAACCATGCCGTAAGTGACTTCCATCAATCACCTTCAATTGAACCTAAAGAATCTATTGAACGAAATGAAGTGGTTGAGAAGCAGAACCTTGATGCATCGGTTCAGATTGAGAGTGCAGTCACCCTTTCTCCTGAAAAATATTCTGTTTCTATTTCTGAGAGCTGTGCAGATGGCACAAGGGGGGATGAAAAAGTTCACAATCAATCCTCTCTTACAACTATAGATCATGAAGTTTCAGATGAATCTCAAGGACCGGATGCAACAGGAGTATCATGCTTATCTGCAAGCCATACAAATTCAGATTCTTCCAGTATCAGATTTCCTCAAACTGGTGCTTCTGGAGCATTCCCTTCAGCTGTTGATGGGAGTGAGCCCATCTATGAAGGGGAGGAATGTGTATTGGATCCAAGAACTGAAAATATTGAGGATCGTGAACCTGTTTATGAAGGTGAGGCGGTGCTTCAGGAACAGGCTGACAAAAGCACCTTAGCTAAGGAAGAAATGACTCCAGAACAAGGAGAACTGGTCAAGAGTTTTTTGATGAATAATGCCAGTCAGTTGACAATTTGCGGGCTTTTTAGTCTACAAGCTGGTCTTAAAGAGCGTGAGTTACGTGTTTTTTTCCGAAACAATCATTTCAGCACCATGTTTAAGTTTGAGGGTGCGCTCTATCTTCTAGCTACAGACCAAGGCTACATAAATCAGCCTGATCTGGTTTGGGAATCACTGAATGAGGTCAATGGTGATACATTGTTTATGACTGGTAATTTCAAGGAATTCAAGGTAGAAAGCCAGGAAAATAACACCTGGGATGAGAACAATGCTATGACCAGCACTGCTGACTATCTTGCTAGCATAGAGAGTGCAGCGCAAGCAGGCTTAGGAGATGTCATCGATCGTGATTTACAAATGGCAATAACAATGCAACAAGAAGAGTTTGAGCAGCAGCCACCACGTAACAATCAACAACCACAATCCAATAGTGGTAGCTCCAGACTGGTCACAGGTCCCCAGGTTGCAAGAAGCTCTGGAAGGAATCCATCTTCATCTCCCAGGCCTGATAAATCCAAAGAAAAATGTATAGTGATGTGA 2169 0.42 MDMAASSSSSPPTDEPPQHHDLQQQQQHPPPPPLKEFLHKTKLIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNQLSLGSDITEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQLQNIADAIDLLPRLATGIDVNLKFTGIQDFEFTPECAIFDLLDIPLCHGWLVDPQDHDTATAIGSKSYNALMEKLVSLETRNIEIPPKNNPEEDCVDFVAATTAALGVPSPSLSKARSFDDSPHSVSDQAPRKGDLEEEEELLRALKLSEIDSKASISDPFVGHANDNGGEVSFGMDENTCNKQAVTVDSGVDLGKSTGKESNDFHESETAIPDDCTVSSKHYNEHISSTSTVGEAANSSLKNHAVSDFHQSPSIEPKESIERNEVVEKQNLDASVQIESAVTLSPEKYSVSISESCADGTRGDEKVHNQSSLTTIDHEVSDESQGPDATGVSCLSASHTNSDSSSIRFPQTGASGAFPSAVDGSEPIYEGEECVLDPRTENIEDREPVYEGEAVLQEQADKSTLAKEEMTPEQGELVKSFLMNNASQLTICGLFSLQAGLKERELRVFFRNNHFSTMFKFEGALYLLATDQGYINQPDLVWESLNEVNGDTLFMTGNFKEFKVESQENNTWDENNAMTSTADYLASIESAAQAGLGDVIDRDLQMAITMQQEEFEQQPPRNNQQPQSNSGSSRLVTGPQVARSSGRNPSSSPRPDKSKEKCIVM 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00423 722 MobiDBLite consensus disorder prediction 309 328 - -
Trre9g00423 722 MobiDBLite consensus disorder prediction 671 722 - -
Trre9g00423 722 PANTHER NF-E2 INDUCIBLE PROTEIN 14 719 IPR007518 GO:0004843|GO:1990380
Trre9g00423 722 MobiDBLite consensus disorder prediction 227 255 - -
Trre9g00423 722 Pfam MINDY deubiquitinase 68 193 IPR033979 GO:0004843|GO:1990380
Trre9g00423 722 MobiDBLite consensus disorder prediction 671 709 - -
Trre9g00423 722 MobiDBLite consensus disorder prediction 434 482 - -
Trre9g00423 722 ProSitePatterns Glycosyl hydrolases family 5 signature. 597 606 IPR018087 GO:0004553|GO:0005975
Trre9g00423 722 MobiDBLite consensus disorder prediction 1 25 - -
Trre9g00423 722 MobiDBLite consensus disorder prediction 434 470 - -
Trre9g00423 722 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00423 Trre-Chr9 3077286 3083045 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00423 K01309 - gmx:100808340 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00423 9 3077286 3083045 Trre9g00423 9 3077286 3083045 ECH