Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00351 ATGGGCATTGCCATAGCATCACTACCTCTCTCAATATCTCAACAAAAACATCATAATATCAAACCCAATTCTAATTATTCTAAGACATACAACACATACTTACTAATCCAATGTTGTCAAAACCAAACAGAACACAATCAACACATAGATTCACTGACCAACAACAATGGACATACTAGGTTTCCAGAGAAAAATCCTCTCATAAATCCTTTAGTAGCTTCCACTTTTGGTGTAGTACCTCCAAGGCCTAGAAGAATAATTCTTGTTAGACATGGAGAGAGTGAAGGAAATGTTGATGAAAGTGTTTACACAAGGGTACCTGATCCAAAAATTGGTCTAACTAAGAGAGGAAAAGTTCAAGCAGAGGAATGTGGACAAAGAATCAAGAACATGATTGAGAAAGATAGTGATGAAAATTGGCAACTCTACTTTTATGTGTCTCCATATAGAAGGACTCTGGAAACTTTGCAAAGTTTAGCTCGGCCTTTTGATCGCTCGAGAATTGCTGGTTTTAGAGAAGAGCCTCGCATTCGAGAACAAGATTTCGGGAATTTTCAAAATAGAGAGTTGATGAAAGTTGAAAAAGCGCAACGCCATCTTTATGGTCGTTTCTTTTACCGATTTCCAAATGGAGAATCTGCTGCTGATGTATATGATAGAATCACAGGATTTAGGGAAACACTTAGAGCAGATATTAATGTTGGACGGTATCAGCCACCCGGAGAGAAGAATTTTGACGTGAACTTAGTCATCGTGTCGCACGGTTTAACGCTTAGAGTTTTTCTTATGAGGTGGTACAAATGGACAGTTGAACAGTTTGAGGGTCTTACCAACTTTAACAATGGAGCCGAGCTTGTCATGGAAAGGGGTTATGGTGGAAGGTATAGCTTATTGATGCACCATGATGAACAAGAGTTAAGACAATTTGGATTGACTGATGAAATGCTGATTGATCAAGAATGGCATAAAGTTGCAAGACCTGCTGATCTGAATTACGATTGTCCAATGGTGAATTCTTTCTTTCCTCATCTTCAAGAAGAAACAATCAGAATCCAACAACAAGGATAG 1068 0.3839 MGIAIASLPLSISQQKHHNIKPNSNYSKTYNTYLLIQCCQNQTEHNQHIDSLTNNNGHTRFPEKNPLINPLVASTFGVVPPRPRRIILVRHGESEGNVDESVYTRVPDPKIGLTKRGKVQAEECGQRIKNMIEKDSDENWQLYFYVSPYRRTLETLQSLARPFDRSRIAGFREEPRIREQDFGNFQNRELMKVEKAQRHLYGRFFYRFPNGESAADVYDRITGFRETLRADINVGRYQPPGEKNFDVNLVIVSHGLTLRVFLMRWYKWTVEQFEGLTNFNNGAELVMERGYGGRYSLLMHHDEQELRQFGLTDEMLIDQEWHKVARPADLNYDCPMVNSFFPHLQEETIRIQQQG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00351 355 Gene3D - 82 320 IPR029033 -
Trre9g00351 355 SMART PGAM_5 85 261 IPR013078 -
Trre9g00351 355 SUPERFAMILY Phosphoglycerate mutase-like 83 300 IPR029033 -
Trre9g00351 355 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 82 347 - -
Trre9g00351 355 Pfam Histidine phosphatase superfamily (branch 1) 86 288 IPR013078 -
Trre9g00351 355 CDD HP_PGM_like 85 299 IPR013078 -
Trre9g00351 355 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 88 97 IPR001345 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00351 Trre-Chr9 2518694 2520549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00351 - - psat:127120748 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00351 9 2518694 2520549 Trre9g00351 9 2518694 2520549 ECH