Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00331 ATGCAATCACATTCACTCTCTTCGTTTCCCAAACCATTCGCATCATCATCATCCTCTTCTTTTACTTTTCGCTCTAACACTCTCCGATCTTCATCTTTCGCCACGTCACTCCTCTCTCACTGCAACCGCAATCTACCGCCACGTATTCAAATCGGTAACATTTTTCGAGGCACAACGGAATTCGTTCGTGCTTACAAGCATTACCGCGCTGAATCATATGAACTTCAAAATTCCGATGAATCTGTTGCTCGAAACTCCGATTGTGAATGTGACTTAGCAACACCGATTGTTTCGTCTGATGATGATAATAATGGATCCTCGGGACTTGTGAAGTTTATGCTGTTATTTGCTTTCTTCGCGCTTCGAGACTCTCATCCAGCTTCTGCTGCTGCTTCTGATTTTGCTACTGGTTTGAATTCGATTCCTGTATTTGGAGATGTCGGTGACTTAAGCACAGGTTTTGCTTCAGCTTTTCTGCTGATTTTTTTCTCTGAACTGGGAGACAAGACCTTTTTCATTGCAGCACTGTTAGCAGCTAGGAATTCAGCTGGTGTTGTTTTTGTTGGGACATTTGGTGCACTTGCGGCAATGACTGTCATATCTGTCGCTCTTGGACGAACGTTTCATTATGTTGACGAACTCTTGCCGTTCAGGTTTGGACAAACTGATTTACCTATTGATGATATTGCTGCTGTTTGCCTATTGGTATACTTTGGTGTTTCTACCCTGCTAGATGCCTCGTCTAGTGATGGCCAAAAATCAGATGATGAACAAAAGGAGGCAGAGTTAGCAGTTTCTGAATTTTCTGGAAACGGTGCTGGGATAGTAGCTGCTGCTAGCACAATTGTCAGCACTTTTCTCTTAGTTTTTGTTGCTGAGTGGGGTGATAAATCATTTTTCTCCACAATTGCCCTTGCAGCTGCTTCTTCACCCCTGGGAGTCATAGCTGGATCACTGGCCGGTCATGGTGTTGCAACTTTGCTAGCAGTACTTGGTGGCTCGTTACTGGGGACATTTTTGTCGGAGAAGGTTATTGCTTACATCGGAGGTGTTCTCTTTCTCGTCTTTGCTGCAGTAACTGTATTTGAAATTGTACAATAG 1101 0.4369 MQSHSLSSFPKPFASSSSSSFTFRSNTLRSSSFATSLLSHCNRNLPPRIQIGNIFRGTTEFVRAYKHYRAESYELQNSDESVARNSDCECDLATPIVSSDDDNNGSSGLVKFMLLFAFFALRDSHPASAAASDFATGLNSIPVFGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFVGTFGALAAMTVISVALGRTFHYVDELLPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDDEQKEAELAVSEFSGNGAGIVAAASTIVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTVFEIVQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00331 366 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 149 362 IPR001727 -
Trre9g00331 366 MobiDBLite consensus disorder prediction 1 20 - -
Trre9g00331 366 Pfam Uncharacterized protein family UPF0016 156 239 IPR001727 -
Trre9g00331 366 Pfam Uncharacterized protein family UPF0016 284 357 IPR001727 -
Trre9g00331 366 ProSitePatterns Uncharacterized protein family UPF0016 signature. 165 174 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00331 Trre-Chr9 2387807 2392271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00331 - - gmx:100809618 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00331 9 2387807 2392271 Trre9g00331 9 2387807 2392271 ECH