Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00323 ATGCGTAGCCGGGGATCACAAAACCGGCTATCTGGTACTAACTCTTTTGGATCTCGAGTTTCTGCTCTTATTTTTGCCATGATTGCTACCATGGCAACTATATATGTTGCCGGCCGGCTATGGCAAGATGCGCAGAGTAGGGTCTATTTAATCAAACAGCTTGAAAAAAGAACTTCTCAGGGTCATTCTGCCGTATCTGTTGATGATACACTGAAAATCATAACCTGCAGGGAACAGCAAAAGAAGTTGTCTGCTCTAGAGATGGAGTTATCTGCAGCTAGAAAGGAAGGGTTTGTTCCAAAGAAATTATCATCCAGCGATGGGAAGCAACCTACAAAAAAGATACTTTCGGTTATTGGAGTAATGACAACCTTCGGCCGAAAAAAGAATAGAGATGCAATTCGTAAGGCATGGATGCCATCAGGTGCATCTATAAAAAATCTCGCAGAACAGAAAGGCATCATTGTGAGATTTGTAATAGGAAGAAGTGCAAATCGTGGAGACAGTTTGGACAAAGAGATTGAAACAGAAAATAGCCAGACCAATGACTTCATCATTCTTGATGATCAAGTAGAGGCAGTTGAAGAGAATGCAAAAAAGACAAAGTCGTTCTTCATTTATGCCGTGGACAACTGGGATGCTGAATTTTATGCTAAGGTCAATGATGATATCTATGTTAATCTTGATGCCCTTGGAGGAGTGCTAACTTCTCATTTGGACAAAACCCGTGTATATATTGGTTGTATGAAATCGGGCGAAGTTTTCTCTGAACCGACACATAAATGGCATGAGCCAGACTGGTGGAAATTTGGCGATGGAAAATCGTACTTTCGACATGCTTCAGGAGAGGTCTATGCCATTTCAAAAGCATTGGCTCAGTTTATTTCAATAAACAGATTTATTCTCCGTACATATGCGCATGATGATGTAAGTACTGGATCATGGTTTATTGGGCTGGACGTGATGCACATTGATGAAAATAAATTTTGCTGCTCATCCTGGTCCACAGGGGCAATTTGTGCAGGAGTATGA 1032 0.4118 MRSRGSQNRLSGTNSFGSRVSALIFAMIATMATIYVAGRLWQDAQSRVYLIKQLEKRTSQGHSAVSVDDTLKIITCREQQKKLSALEMELSAARKEGFVPKKLSSSDGKQPTKKILSVIGVMTTFGRKKNRDAIRKAWMPSGASIKNLAEQKGIIVRFVIGRSANRGDSLDKEIETENSQTNDFIILDDQVEAVEENAKKTKSFFIYAVDNWDAEFYAKVNDDIYVNLDALGGVLTSHLDKTRVYIGCMKSGEVFSEPTHKWHEPDWWKFGDGKSYFRHASGEVYAISKALAQFISINRFILRTYAHDDVSTGSWFIGLDVMHIDENKFCCSSWSTGAICAGV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00323 343 Coils Coil 76 96 - -
Trre9g00323 343 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 80 322 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre9g00323 343 Pfam Domain of unknown function (DUF4094) 18 95 IPR025298 -
Trre9g00323 343 FunFam Hexosyltransferase 106 335 - -
Trre9g00323 343 Pfam Galactosyltransferase 130 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre9g00323 343 Gene3D - 107 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00323 Trre-Chr9 2323431 2328264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00323 23 343 Glycosyltransferase AT5G53340 67.913 2.59e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00323 K20854 - gmx:100802753 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00323 9 2323431 2328264 Trre9g00323 9 2323431 2328264 ECH