Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00314 ATGCTTGACAATGTAGCTGGAGCGAGGCAGGTTTTCGAGAGGTGGATGAAATGGATGCCGGATCAACAAGGATGGTTATCTTATATAAAATTTGAACTGAGATATAATGAGATTGAACGAGCGAGAGGGATTTTCGAGAGATTTGTTTTGTGTCATCCTAGGGTTGGTGCTTGGATACGATATGCGAAGTTTGAGATGAAGAATGGCGAGGTTCCTAAGGCGAGGGCTGTTTATGAGAGAGCAGTGGAGAGGCTTGCGGATGATGAGGAAGCTGAGTTGCTTTTTGTGGCGTTTGCTGAGTTTGAAGGAAGATGCAAGGAGGCAGAGAGGGCGAGGTGTATATATAAGTTTGCGCTTGATCATATTCCGAAAGGAAGGGCTGAAGATTTGTATCGGAAGTTTGTTGCATTTGAAAAACAGTATGGTGATAGGGAAGGGATTGAGGATGCTATTGTTGGTAAGAGAAGGTTTCAGTACGAAGATGAAGTGAGAAAAAATCCATTGAATTATGATTCTTGGTTTGATTATATAAGATTGGAAGAGAGTGTGGGGAATAAGGAAAGAACTAGGGAGGTTTATGAGAGAGCTATTGCTAACGTGCCTCCAGCCGAAGAGAAGCGATACTGGCAGCGTTATATTTATTTGTGGATTAATTATGCACTTTATGAAGAGCTTGACACCGGAGATATGGAACGAACAAGAGACGTGTACAAGTAA 717 0.4226 MLDNVAGARQVFERWMKWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPRVGAWIRYAKFEMKNGEVPKARAVYERAVERLADDEEAELLFVAFAEFEGRCKEAERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERTREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDTGDMERTRDVYK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00314 238 SUPERFAMILY TPR-like 4 92 IPR011990 GO:0005515
Trre9g00314 238 SUPERFAMILY TPR-like 97 238 IPR011990 GO:0005515
Trre9g00314 238 PANTHER PRE-MRNA SPLICING FACTOR 3 238 IPR045075 GO:0000398
Trre9g00314 238 SMART hat_new_1 106 140 IPR003107 GO:0006396
Trre9g00314 238 SMART hat_new_1 3 34 IPR003107 GO:0006396
Trre9g00314 238 SMART hat_new_1 36 67 IPR003107 GO:0006396
Trre9g00314 238 SMART hat_new_1 150 182 IPR003107 GO:0006396
Trre9g00314 238 SMART hat_new_1 69 104 IPR003107 GO:0006396
Trre9g00314 238 SMART hat_new_1 184 218 IPR003107 GO:0006396
Trre9g00314 238 Gene3D Tetratricopeptide repeat domain 1 156 IPR011990 GO:0005515
Trre9g00314 238 Gene3D Tetratricopeptide repeat domain 159 238 IPR011990 GO:0005515
Trre9g00314 238 Pfam HAT (Half-A-TPR) repeat 37 65 IPR003107 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00314 Trre-Chr9 2259104 2259920 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00314 K12869 - gmx:100791616 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00314 9 2259104 2259920 Trre9g00314 9 2259104 2259920 ECH